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scnpilot_p_inoc_scaffold_16144_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..420)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Afipia birgiae RepID=UPI0002EA45C2 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 140.0
  • Bit_score: 260
  • Evalue 9.50e-67
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53112.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 140.0
  • Bit_score: 255
  • Evalue 5.60e-65
type IV secretion/conjugal transfer ATPase similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 140.0
  • Bit_score: 252
  • Evalue 5.60e-65

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGTCGCCCGCGCACTGCTCGATGAACTGACCTTCGGCGCCGTCTCGCGGCGCGAACGTCCGGTTTCCTCGCATGTCCCGTATACCAGGCATGTCGACGACCACATCATCCGCACGCGCGACGGGCTGGTCCTGACCATCTTCAAGCTCGAAGGTTATCCCTTCGAAACGTCGGATATCAGCGAGGTCAATGCGCGCCTGCTGGGCCGCAATGACGTCGTCCGGACACTCGCGAATTCTCGCTTCGCCCTCGTCTCTCATATCGTGCGGCGCGAAGTTCAGCCGCGGATCGACTCCAGCTTCAACAATCCGTTCTGCCGGGAACTCGACGAGCGCTACAACGCCGCGCTGTCGAAGCGGCGAATGTTCGTCAACGACCTCTATCTGACGGTGGTTCGCCGTCCCTTGCAGGGCCAGGCC
PROTEIN sequence
Length: 140
MVARALLDELTFGAVSRRERPVSSHVPYTRHVDDHIIRTRDGLVLTIFKLEGYPFETSDISEVNARLLGRNDVVRTLANSRFALVSHIVRREVQPRIDSSFNNPFCRELDERYNAALSKRRMFVNDLYLTVVRRPLQGQA