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scnpilot_p_inoc_scaffold_15009_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 461..652

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Pedobacter agri RepID=UPI00029A9DE8 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 118
  • Evalue 2.70e-24
Cold-shock protein {ECO:0000313|EMBL:KIA95338.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheens similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 117
  • Evalue 8.20e-24
DNA-binding cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 63.0
  • Bit_score: 116
  • Evalue 2.80e-24

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGCAACAAGGAACAGTAAAATTTTTCAATGAGACAAAAGGTTTTGGCTTCATTACACCTTCTAATGGCGATGCCGAAATTTTTGTACATAGCTCGGGCTTGATCGACGAAATTCGCGAGAATGATTCGGTTAGCTATGAGGTAGAACAGGGCAGGAAAGGCCTAAATGCAGTTAACGTTACGATAGCTTAA
PROTEIN sequence
Length: 64
MQQGTVKFFNETKGFGFITPSNGDAEIFVHSSGLIDEIRENDSVSYEVEQGRKGLNAVNVTIA*