ggKbase home page

scnpilot_p_inoc_scaffold_15031_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..440)

Top 3 Functional Annotations

Value Algorithm Source
Putative succinoglycan biosynthesis protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXH5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 137.0
  • Bit_score: 214
  • Evalue 6.30e-53
Uncharacterized protein {ECO:0000313|EMBL:EYR82775.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 137.0
  • Bit_score: 214
  • Evalue 8.80e-53
succinoglycan biosynthesis protein EXOI similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 151.0
  • Bit_score: 112
  • Evalue 1.20e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCGGATTGAGCTTTCGATCGTCACTGCGCTGCTGGTCGCCGGTGCAGCATCGGCGCAGGAGAAAACCATCTCCTTTCCATCGGCCGTGAGCTTCGAGACCGGCGACACCTGGGCGTATGAAGGCCGGAAATACAGGCTGTTCGGCGTGCAAGCCTGCCTCCGCAACACCATCTATCGCGCTCCCGACGGGACCGAAGCCGATTGCGGGCTGCAGTCGATCGGATCGCTCGCGGCGCTGTTTTCCACCGAATCAGTCGGCTGCCAGCCGGTCGGCACGGCGAAGGACGAGGCGACCTTTGTCGTCTGCGCCGCTCAGGTTGGCAGCGCCACGATCGATGTCGGGACCGCCCTGATTTCGTCTGGCGCTGCATTCGCGGCGACTTTTCCGTCGGGCGCGCCGGTTTCGGCAGCCTATGCGGTCGCCGAGACGACCGCG
PROTEIN sequence
Length: 146
MRIELSIVTALLVAGAASAQEKTISFPSAVSFETGDTWAYEGRKYRLFGVQACLRNTIYRAPDGTEADCGLQSIGSLAALFSTESVGCQPVGTAKDEATFVVCAAQVGSATIDVGTALISSGAAFAATFPSGAPVSAAYAVAETTA