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scnpilot_p_inoc_scaffold_15031_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2066..2356

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3 component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFD6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 96.0
  • Bit_score: 183
  • Evalue 1.30e-43
Type IV secretory pathway, VirB3 component {ECO:0000313|EMBL:EYR82771.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 96.0
  • Bit_score: 183
  • Evalue 1.90e-43
type IV secretory pathway, VirB3-like similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 98.0
  • Bit_score: 66
  • Evalue 5.10e-09

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGCGTGACGATGCGCCCGATGTCGAACCGCTCATCCAGCCGCTGACCCGGCCGCCGACATATTTCGGGGTCGACATCATCGTGTTCGTGGTGAACGGCATCTTCGGGATCGTCATCTTCATCGCATCGTCGAACTTCCTGGCGCCGCTGGTCGTCCTGCCGATCCATTTCATCGCGCTTTACCTGTGCCAGCGGGACATCCACATCGTCCGTGTCGTGCAGGTGTTCCTGTCGATGCGCAGGGCGATCCGCAACAGGCGTTTCTGGAAAGCGGGGAGCTACGCGCCATGA
PROTEIN sequence
Length: 97
MRDDAPDVEPLIQPLTRPPTYFGVDIIVFVVNGIFGIVIFIASSNFLAPLVVLPIHFIALYLCQRDIHIVRVVQVFLSMRRAIRNRRFWKAGSYAP*