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scnpilot_p_inoc_scaffold_15133_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2585..2965

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1S9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 126.0
  • Bit_score: 237
  • Evalue 6.00e-60
DNA-binding protein {ECO:0000313|EMBL:KGJ03416.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.; similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 126.0
  • Bit_score: 246
  • Evalue 2.40e-62
transcriptional regulator helix turn helix domain similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 126.0
  • Bit_score: 222
  • Evalue 5.60e-56

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Taxonomy

Paracoccus halophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGCAACTGACCTGAAGCCGATCCGCACGGAAGCGGATTACGAAGACGCACTCGCGGAAGTCGAACGGCTGTGGGGCGCCAGGAGCGGCACGCCGGAAGGCGACCGCCTCGACGTGCTGGCGACGCTGATCGATGTCTATGAGGCGAAGCACTATCCGATGGACCCACCCGATCCGGTGGAAGCGATCCGCTTCCGCATGGAGCAGCAGGGGCTCACCCGCAAAGATCTGGAACCGATGATCGGCCCGCGCAACCGCGTGGCGGACGTGCTGAACCGCAAGCGCAGCCTGTCGATCGACATGATCCGGCAATTGCACGCCCGTCTCGGCATCTCGGCCGAGGTACTGATCCAGCCGAGCCGGATGGACAAGGTTGCGTAG
PROTEIN sequence
Length: 127
MATDLKPIRTEADYEDALAEVERLWGARSGTPEGDRLDVLATLIDVYEAKHYPMDPPDPVEAIRFRMEQQGLTRKDLEPMIGPRNRVADVLNRKRSLSIDMIRQLHARLGISAEVLIQPSRMDKVA*