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scnpilot_p_inoc_scaffold_14772_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1258..1662

Top 3 Functional Annotations

Value Algorithm Source
RhoGEF domain containing protein (Fragment) n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GWS6_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 112.0
  • Bit_score: 133
  • Evalue 2.20e-28
RhoGEF domain containing protein {ECO:0000313|EMBL:ELR17402.1}; Flags: Fragment;; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 112.0
  • Bit_score: 133
  • Evalue 3.10e-28
FAD dependent oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 103.0
  • Bit_score: 109
  • Evalue 9.60e-22

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Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 405
ATGTTTTCGGTATCACGCCGCTTCGCGACCCTGCGCAAGGCCAGCATCGTCGGCAAGTACGCGCCCCCGCCCTCCGCGCCCGCCGCGGCCGCCACCGCGGCCCTGGCCTCGGCCAAATGGGACGCCGTCATCGTCGGCGCGGGCCACAACGGGCTTATTGCCGCCAACTACCTCGCTGACGCCGGACAGAAGGTGCTCGTGCTGGAGCGCCGACACGTCGTCGGCGGCGCCGCCGTCACGGAGGAGCTCGTCCCCGGGTTCAAGTTCTCGCGCGCGTCCTACCTCGCCGGCCTGCTGCGCCCGCAGATCATCAAGGACTTTGAGCTCGAGAAATACGGGTATGTTATCGCTCTCATTTCTTCCGACTCACTTTATCGCCATTGTTCATTCCGCCATCCCTCGTGA
PROTEIN sequence
Length: 135
MFSVSRRFATLRKASIVGKYAPPPSAPAAAATAALASAKWDAVIVGAGHNGLIAANYLADAGQKVLVLERRHVVGGAAVTEELVPGFKFSRASYLAGLLRPQIIKDFELEKYGYVIALISSDSLYRHCSFRHPS*