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scnpilot_p_inoc_scaffold_17443_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 899..1639

Top 3 Functional Annotations

Value Algorithm Source
Pilus assembly and synthesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 246.0
  • Bit_score: 475
  • Evalue 3.30e-131
Pilus assembly and synthesis protein {ECO:0000313|EMBL:EGD60464.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 246.0
  • Bit_score: 475
  • Evalue 4.70e-131
conjugal transfer protein TraH similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 247.0
  • Bit_score: 183
  • Evalue 7.40e-44

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCTCTCCCAAAAATACCCGAGCTTCGACACCGCCTTCAAACAATACCTGATGAGTCTGGTCGGCACGGTGATCTACCAGCCAGGCACCAGCGACACCCAGGGCCCCACCTTCAAGTTTCTGGGGCAAGGTGATCCTGCACTCATCACCGCGCTGCTCGATGGCGGCAACAGCGCCAGCGTTTATACCTGCGACACCACCGACAAATGCCTCAACCCAACGCAGACCAGCCTGTCGGTCAGCACCGGCAATGCGCTCAAGACCCGCGTCTACAACCTTCTGATCGACATCGCCGGGCGCATTCAGGGCAACCAGCAACTGACCTCAGAGGAGATCGGCCTGCTCGGTGCCACCACGATCCCGCTCTACAAGATCATGGTGGTGAATGCCGCGGCGAGCTTTGGTGGCATGAACTCGGCCGACATCTCCAGCCTTTCTGAAATCACCTCGGTCGACCTGCTCGAGACCGTCGTCGGACAGTTCTACCGGCTTGTGACCGACGGCCAGTCCTCGTTCCAGAACGCCGATCCGCTGACCCTCAAGCAGTGGCAAGACCAGCTTCGCGATGTGACCAAGACGCTGGACGCGCAGGTGGTCCACAATTCCGAGCGCCTGACCCGCACCGAGCAGATCCTCGAACGAACAATCCGCATCGAGGCCACGCTGCGCAACACAATGTCCCCCCAGATGACCGCCGCGCTCCAGTTCGAGAGGTCGCTCGGCCAGCATCCGCTTCAGTGA
PROTEIN sequence
Length: 247
MLSQKYPSFDTAFKQYLMSLVGTVIYQPGTSDTQGPTFKFLGQGDPALITALLDGGNSASVYTCDTTDKCLNPTQTSLSVSTGNALKTRVYNLLIDIAGRIQGNQQLTSEEIGLLGATTIPLYKIMVVNAAASFGGMNSADISSLSEITSVDLLETVVGQFYRLVTDGQSSFQNADPLTLKQWQDQLRDVTKTLDAQVVHNSERLTRTEQILERTIRIEATLRNTMSPQMTAALQFERSLGQHPLQ*