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scnpilot_p_inoc_scaffold_16995_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2220..2600

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=2 Tax=Bradyrhizobiaceae RepID=F7QLY6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 210
  • Evalue 7.90e-52
Uncharacterized protein {ECO:0000313|EMBL:EKS42425.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 126.0
  • Bit_score: 224
  • Evalue 7.30e-56
AraC type helix-turn-helix-domain containing protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 117.0
  • Bit_score: 100
  • Evalue 3.20e-19

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGAAGACGGTTTCTTCATTACGCGCGGTGCGCGCCTCGGCGCGATCAAGTCGTTCATTCTGAGCAGGATCGACAATCCCGAGCTTTGCCTCGACGACGTCGCGGCTCATCAGGACATTTCATCGAGTTATGTCCGCAAACTGTTCGCGGCGGAGGGGGCGAAGTTTACGTCCTTCGTACTCGAGACACGCCTGCAGAAAGTTTTGCAGATGCTGGCTGATCCGGAGTCGCGCGGGCACCCCATCAGCGTTATCGCGCTGAAATGCGGCTTCAACGATATTTCCTATTTCAACCGGGTATTCCGCAAGCGTTACGGCTGTACGCCGTCGGACCTTCGCTACGGCCGCGTACCCGACGCCCGGCTTACAGCAAACGGCTGA
PROTEIN sequence
Length: 127
MEDGFFITRGARLGAIKSFILSRIDNPELCLDDVAAHQDISSSYVRKLFAAEGAKFTSFVLETRLQKVLQMLADPESRGHPISVIALKCGFNDISYFNRVFRKRYGCTPSDLRYGRVPDARLTANG*