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scnpilot_p_inoc_scaffold_17723_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 182..997

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035F0D65 similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 270.0
  • Bit_score: 116
  • Evalue 4.30e-23
LysR substrate binding domain protein {ECO:0000313|EMBL:EFF75282.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro similarity UNIPROT
DB: UniProtKB
  • Identity: 29.5
  • Coverage: 281.0
  • Bit_score: 100
  • Evalue 4.50e-18
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 264.0
  • Bit_score: 97
  • Evalue 7.60e-18

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Taxonomy

Achromobacter piechaudii → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
TTGTCTCAACCCGCGCTGAGCATCCAGCTGAAGCAGCTCGAATCGAAGCTCGGGGTCCAGCTGGTTTTACGGTCGAACGCGCAAAAACAGATCGAGCTGACGGCCGCCGGCGCGGAATTCCTGGTGGGCGCGCGCCACGCCGTCCAGATCCTGCAAGACGTCATCGACCGCATCAGCCCCCCGGACCGGCATGACAAACCGCAGTTGCGCGTCGCCTGCCTGCCGTCGCTGTTGCAGGACGTCATATCTCCGGTGCTGGCCGAGCTGTCGAAAACCCACCCCCATGCGCAGCTTTCCGTGCTGGACGGCGACTCGTCGGCGTGCTCGACGCTGCTCAGCGGCAAGAAATGCGACGTCGCGCTTTGTTCGCGCCCCGTCAATGGGCCGGACATCAAGTCCGAATGCCTGTTCTCCGAACAATTCTGGGCGGTCGTGCGCAAAGACGACGCGCGCGCCGGCCGCGACTACCTGACCCTGGACGATTTCACCGACACCACCATCGTCAACCTGACGGACAACCACGCGGTCAGCGCAAGCCTGCTGACGCGCTCCCTGCCCTATATCCAGGTGAACACCATCACCGCCCTGGAAAGCATGCTGGCGCAGGGGGTGGGCGCCGCCATCGTCGCGCATTCCACCGCGCTGACCATACAGCATCCGACGCTGGTGAAAATTCCCCTGGCCGACCGCGAAGTCACGCGGCAGATTTTCCTTTCCTGGACGGCATCGCCGGCCAACCCCCTGGTCTTCGCGTTCATCGAGCGCCTGCGCAGGCAGACCGAGCGCAATGTCCTGGGCCTTTCGGCCCGGCCTTAG
PROTEIN sequence
Length: 272
LSQPALSIQLKQLESKLGVQLVLRSNAQKQIELTAAGAEFLVGARHAVQILQDVIDRISPPDRHDKPQLRVACLPSLLQDVISPVLAELSKTHPHAQLSVLDGDSSACSTLLSGKKCDVALCSRPVNGPDIKSECLFSEQFWAVVRKDDARAGRDYLTLDDFTDTTIVNLTDNHAVSASLLTRSLPYIQVNTITALESMLAQGVGAAIVAHSTALTIQHPTLVKIPLADREVTRQIFLSWTASPANPLVFAFIERLRRQTERNVLGLSARP*