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scnpilot_p_inoc_scaffold_18001_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2188..2478

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI000360D518 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 96.0
  • Bit_score: 142
  • Evalue 2.60e-31
Pirin {ECO:0000313|EMBL:KGO99441.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DS similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 93.0
  • Bit_score: 143
  • Evalue 1.60e-31
virulence associated protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 96.0
  • Bit_score: 139
  • Evalue 4.80e-31

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCCAAACTGAAAAATATTCACCCCGGTGAAATCCTGCTGGAAGAGTTCCTGATTCCCATGGGCATCAGCCAGAATGCCCTGGCGCGCGCAATCAGCGTGCCGCCGCGCCGGGTCAATGAAATCGTATTGGGCAAACGCGGCATCACCGCCGACACGGCGCTGCGCCTGTCGCGCGCATTCGGCACCAGCGAGGGATTCTGGATGGGCCTGCAGGCGGATTACGACCTGGAAGAGACGCGCAAGCTAATCGATGATGTGTTACGGCATGTGGAGAAGCTGGCGGCGTAG
PROTEIN sequence
Length: 97
MAKLKNIHPGEILLEEFLIPMGISQNALARAISVPPRRVNEIVLGKRGITADTALRLSRAFGTSEGFWMGLQADYDLEETRKLIDDVLRHVEKLAA*