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scnpilot_p_inoc_scaffold_18380_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1102..1983)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain-containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7R5_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 290.0
  • Bit_score: 299
  • Evalue 3.90e-78
Uncharacterized protein {ECO:0000313|EMBL:KDA07183.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 293.0
  • Bit_score: 503
  • Evalue 2.50e-139
typeII/IV secretion system integral membrane protein, TadC -like protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 292.0
  • Bit_score: 224
  • Evalue 4.50e-56

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGAACCTGTTCGCACTCATCCCCGGCCTGATCCTCGGCGCCGGCGTCGCGCTCATCGTCAGCGCGCTCATCCCGCGGCAGCCCCACCTGGCCGCCACGCTCGACCGTCTCAGCGTGACCACGATCGCAGCACCCGAACCCGGCGACGACTCGCTGCAGCACCGCATCGGATCGTGGGTCGCCGAGCACCTTCCCGAACGGTCCTGGCTCAAGGTGCCCACCACCGATCTGCGCCTGATCGGGATGCCGCTGGACAAGTACTACTACGACAAGGTGCTCCTGGCGCTCGTCGGACTGTTGTCCCCGCTCGTGCTGGGCCTGTTCGCTCAAGCCCTCAACTTCCTGCCGTTCTACATCCCCGCGCTGCTGGGCCTGCCCATCGCCGTGTGGCTGTGGTTCAGCGTCGACCAGGACATCCGCTCCAAGGCCAACGACGCCCGCGCCGAGTTCACACGCGCGGTCGCCGTCTACCTCGAGCTCGTCGCCGCTGAGCGCAAGCGCGGAGCCACCGCCGCCCGCGCGCTCGAGACCTCCGCCGACGTCGGCCGGTCGTGGGTGTTCGTCCGCATCCGCCAGGAACTCACCCGAGCCCGCTACGCCGGCGTCGCCCCCTGGGACGCGCTGCGCACACTCTCCGACGAGATCGACGTGCCCGACCTGGCCGACGTCGCCAAGATCGTGCGACTTTCGGGGGAGGAAGGCGCATCGATATATGAGACACTCAGATCGAGGGGAAAGACCCTCCGGCACAAGCTCCTAGCCGAGGAGCACGAGAAAGCGAACAGCGCGAGCGAGCGGATGCAGATGCCTCTGGCGACCACCCTGTTCGTCTACGTGGGCATCATCATCACCCCCCTGATCCTGAACCTCCTCGCGACATGA
PROTEIN sequence
Length: 294
VNLFALIPGLILGAGVALIVSALIPRQPHLAATLDRLSVTTIAAPEPGDDSLQHRIGSWVAEHLPERSWLKVPTTDLRLIGMPLDKYYYDKVLLALVGLLSPLVLGLFAQALNFLPFYIPALLGLPIAVWLWFSVDQDIRSKANDARAEFTRAVAVYLELVAAERKRGATAARALETSADVGRSWVFVRIRQELTRARYAGVAPWDALRTLSDEIDVPDLADVAKIVRLSGEEGASIYETLRSRGKTLRHKLLAEEHEKANSASERMQMPLATTLFVYVGIIITPLILNLLAT*