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scnpilot_p_inoc_scaffold_21145_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1419..1832)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 131.0
  • Bit_score: 103
  • Evalue 2.70e-19
Ribonuclease VapC n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZE88_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 131.0
  • Bit_score: 103
  • Evalue 1.90e-19
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 131.0
  • Bit_score: 103
  • Evalue 5.40e-20

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Taxonomy

Methylobacterium populi → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGATGTTCCTTGATGCGTCCGTGATTCTCGCCAACCTGCTGGAAGAGCCCGAAGCGGCCGCGTTCAGGGCGTCGCTGGCCGAAGAGGGCAGGCATGCAACCTCCGCTATTGCCATGTTCGAGGCATCGACGCGGCTTGCCGTGGTCAAGCGTTTGGCCATCGACCGAGCTTATGAAGTTGTCTGTGCCTTCATCGATGGTGCCGGGGTGACGGTTATGCCGATCGGTTCGGAAGTGGGAGGCGCAGCACATGCTTGCGCCGCCCGCTATCATCACCTGACAGGCCATCCGGCCCGTCTCAACATGGGCGATTGTTTCGCCTATGCGGCGGCGCTGACGTCAGGGCTGAAGCTCGCCTACAAAGGCGATGATTTCGTCCACACGGATATCGACGGCATCCGCTTCGGAGCCTGA
PROTEIN sequence
Length: 138
MMFLDASVILANLLEEPEAAAFRASLAEEGRHATSAIAMFEASTRLAVVKRLAIDRAYEVVCAFIDGAGVTVMPIGSEVGGAAHACAARYHHLTGHPARLNMGDCFAYAAALTSGLKLAYKGDDFVHTDIDGIRFGA*