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scnpilot_p_inoc_scaffold_20205_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 228..806

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, TIGR02999 family n=2 Tax=Singulisphaera acidiphila RepID=L0DHE1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 186.0
  • Bit_score: 245
  • Evalue 5.70e-62
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 186.0
  • Bit_score: 245
  • Evalue 1.60e-62
RNA polymerase sigma factor, TIGR02999 family {ECO:0000313|EMBL:AGA28270.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 186.0
  • Bit_score: 245
  • Evalue 8.00e-62

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Taxonomy

Singulisphaera acidiphila → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGGGAATCGAGGCGGATGATCTGACGCAGGTCCTGGCCAGGACGCGGGCGGGTGACGTCCACGCCCGAGGCGAGCTTGTCGCCAGGATTTACGACGAATTGCGCCAGGTCGCCTCCCGGATGATGAAGCGGGAGCGGGTCGATCACACACTGTCGCCCACCGCGATCGTGCATGAGGCCCTTTTGCGGATGCTCGGCGAGGAAGTCCTCGAGCGCGCTCCAGATCGCCACTTTGTGTTCGCCGCGGCGGCTCGGGCCATGCGCGAGATTCTCGTTGATCATTCGCGATACCGCGCGGCGGCGAAGCGGGGCGGGCGTTGGCAGCGGGTCTCGTTCGATCACGTGCTCGACTATTTCGAGGCCCAGAAGCTCGACGTGTCGGAGCTGCACGAGGCGGTCGGCCGGCTCACCGCGCTCGATGAGCGCCAGGGGCAAGTGATCACGCTCCGTTATTTTGGGGGCATGACGATGCCGGAAGTCGCTCAATCCCTGGGGGTTTCGCTCGCCACGGCGGAGCGGGATTGCCGGCTGGCCCGGGCCTGGCTCTATGGAGAGTTCAGGAAGGAACACGAGAAATGA
PROTEIN sequence
Length: 193
MGIEADDLTQVLARTRAGDVHARGELVARIYDELRQVASRMMKRERVDHTLSPTAIVHEALLRMLGEEVLERAPDRHFVFAAAARAMREILVDHSRYRAAAKRGGRWQRVSFDHVLDYFEAQKLDVSELHEAVGRLTALDERQGQVITLRYFGGMTMPEVAQSLGVSLATAERDCRLARAWLYGEFRKEHEK*