ggKbase home page

scnpilot_p_inoc_scaffold_18491_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2823..2993)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJY9_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 56.0
  • Bit_score: 102
  • Evalue 1.40e-19
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 56.0
  • Bit_score: 102
  • Evalue 3.80e-20
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACS21040.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 56.0
  • Bit_score: 102
  • Evalue 1.90e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
CTGCTGAGCCTGACGCAGGGGCGCGAGGCGGAGTTGTTCGAGCGATCCATCGACCTGCTGGTGAGCCGGTTGCGCCAGCGGTTGCGGGACGATGCGCGGGAGCCGCGCTACATCAAGACGGTGCGCAGCGAGGGCTATGTGCTGGCGGCGTCGGTCGAGCCGGTGGACTGA
PROTEIN sequence
Length: 57
LLSLTQGREAELFERSIDLLVSRLRQRLRDDAREPRYIKTVRSEGYVLAASVEPVD*