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scnpilot_p_inoc_scaffold_18528_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1645..2163)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PetP n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R682_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 145.0
  • Bit_score: 202
  • Evalue 3.80e-49
MarR family transcriptional regulator {ECO:0000313|EMBL:KKB13283.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 172.0
  • Bit_score: 276
  • Evalue 2.90e-71
HTH-type transcriptional regulator PetP similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 145.0
  • Bit_score: 202
  • Evalue 1.10e-49

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Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCACTCGGCAAAATAAATGTCAACACTACTGACATAAATTCGGAGCTGCCGACCCCGGACGCCATGCCGCTCGACGTCATGGGCCTGTTTTTCTTCGCCTATCGCGACTTCGTCGGCGATGCCGACGCGCTGCTCGAACGCCAGGGCTTCGGTCGCGCCCACCACCGCGTGCTGTACTTCGTGAATTTGAAGCCGGGAATGCCGGTCGCCGACATTCTCGACATCCTGAAGATCACCAAGCAGAGCCTCGCCCGCGTCCTGCGCCAGCTCATCGACAACGGCTATATCGAGCAGAAGACCGGTGACGCCGACCGCCGCCAGCGCCTGCTCTACGCCACCCAGAAGGGCCGCGACCTGTTCGAGGTGCTGTCGGCTACCCAGACCAGCCGCATCGACGCCGCCATCGCCGCGCTGCCGCCTGACGGCAAGCGCACCGTGCTCAAATTCTTCGTCGGCATGGTCGAGCCCCGCGACCGCCCGACCCTCGACCGCCTGAAGCTGACCGAGGACCTGTAG
PROTEIN sequence
Length: 173
MALGKINVNTTDINSELPTPDAMPLDVMGLFFFAYRDFVGDADALLERQGFGRAHHRVLYFVNLKPGMPVADILDILKITKQSLARVLRQLIDNGYIEQKTGDADRRQRLLYATQKGRDLFEVLSATQTSRIDAAIAALPPDGKRTVLKFFVGMVEPRDRPTLDRLKLTEDL*