ggKbase home page

scnpilot_p_inoc_scaffold_20581_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 954..1763

Top 3 Functional Annotations

Value Algorithm Source
Sel1 repeat-containing protein (EC:3.5.2.6) similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 172.0
  • Bit_score: 106
  • Evalue 1.60e-20
Sel1 domain protein repeat-containing protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UKZ9_AKKM8 similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 216.0
  • Bit_score: 119
  • Evalue 6.60e-24
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:CDB54502.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; envir similarity UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 216.0
  • Bit_score: 119
  • Evalue 9.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Akkermansia muciniphila CAG:154 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 810
ATGTCCACTAGTGAGTCCAAGGTCTCCAACGAGTACGTGCGCATGCGTCACCGTCCCTCTCTAAGCGTGTGTATCCCGCCCGACGACGGCCGCTACATCAAGATCGACGAGACGTTCCCCACGGACTACTCCTCCGCCGTTCTTGCTGCGGGCGCGGGCATCCCCATCGCGGCGGCCCACGCAGCAGCCAATGGCTCGTCATCGTCGTCATCGTCATCGTCGTCGGCCGCGGGGGGCTACGACGGCAACGGCGCACCTGAGCGCTCCCAAGACTACTGGCGCGCGCAGATCCAGGCGTGGAAGGTTGAAGCGATGGCGGGAAACCCCGTGGCGTCGCAGAACGTGGGCGTGGCGCTGTACAAAGGCGAGCTCGGCGTTCCCCGCGACGAGGCCGAGGCGTACAAGTACTTCCGTATTGCCGCCGCGGCCGGGCTTACAACGGCTCAGTTTAACATCGGCTGGTGCTACTGCTCCGGCGCGGGCGTGCCGCAGTCTTGGGCCAAGGCCGTCAAGTGGTGGCGCCGCGCCGCCGAGCAGGGCCACGGGTCCGCCGCTCGCAACCTCGGTCTGCTATTCTCACTGGGCCTTGCGCCCGACGCCACGGGGGTCACGGCGGTCAACCATCACGCCGCGCTCGAGTGGTATCTGCACGCGGCCGGGCTGGGCAACGTCAAGGCCATGCTCGCCGTGGCCAACTGCTACGCCACGGGGCTAGGGACCGCGGTGGATGAGGCCGCCGCGGCGGACTGGCGCGCGCGCGGGGAGGCCGCTGCAGCCGCGGCCGCTGCTAACACGTCCAAGCAGGCCTAA
PROTEIN sequence
Length: 270
MSTSESKVSNEYVRMRHRPSLSVCIPPDDGRYIKIDETFPTDYSSAVLAAGAGIPIAAAHAAANGSSSSSSSSSSAAGGYDGNGAPERSQDYWRAQIQAWKVEAMAGNPVASQNVGVALYKGELGVPRDEAEAYKYFRIAAAAGLTTAQFNIGWCYCSGAGVPQSWAKAVKWWRRAAEQGHGSAARNLGLLFSLGLAPDATGVTAVNHHAALEWYLHAAGLGNVKAMLAVANCYATGLGTAVDEAAAADWRARGEAAAAAAAANTSKQA*