ggKbase home page

scnpilot_p_inoc_scaffold_19732_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..228

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI000375E498 similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 75.0
  • Bit_score: 138
  • Evalue 2.30e-30
cbbR1; transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 75.0
  • Bit_score: 131
  • Evalue 6.60e-28
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 64.0
  • Bit_score: 118
  • Evalue 6.80e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
GCCATCCTCGCCGGCCTCGGCATCTCCGCCCTCTCCCGCCACACCCTCACCCTCAACCAGCCCGGCCAGTTCGCCGTGCTCGACGTCGAAGGCTTTCCCATCCTGCGCCACTGGTACGCCGTATACCCGGCCGGGCGGCAGCTGTCGGTGGTGGCGCGGGCGTTTCTGGATTACCTGCTCGGACGGCAGGAGACGGCGTCCCCGGCAGCAGGCAAAGGGAAGCGTTGA
PROTEIN sequence
Length: 76
AILAGLGISALSRHTLTLNQPGQFAVLDVEGFPILRHWYAVYPAGRQLSVVARAFLDYLLGRQETASPAAGKGKR*