ggKbase home page

scnpilot_p_inoc_scaffold_22674_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 30..341

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWQ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 100.0
  • Bit_score: 195
  • Evalue 2.10e-47
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 103.0
  • Bit_score: 202
  • Evalue 2.40e-49
rplX; 50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 103.0
  • Bit_score: 193
  • Evalue 3.90e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCAAAAGATTCGTAAGGGCGACAAGGTCGTCGTGCTCACCGGCAAGGACAAGGGCCGTACCGGTGAAGTTGTACAGGTCATGCCGAAGGAAGACCGTGCGGTCGTCAAGGGTATCAACCTGGTGAAGCGTCACCAGCGTCAGACCCAGACCCAGGAAGCCGGCATCATCACCAAGGAAGCTTCGATCCACCTGTCGAACATCGCAATCGCCGACCCCAAGGACGGCAAGCCGACCCGCGTCGGTTTCAAGGTCGAGGGCGACAAGAAGGTTCGTGTAGCAAAGCGTTCGGGAGTGTCGATCGATGGCTGA
PROTEIN sequence
Length: 104
MQKIRKGDKVVVLTGKDKGRTGEVVQVMPKEDRAVVKGINLVKRHQRQTQTQEAGIITKEASIHLSNIAIADPKDGKPTRVGFKVEGDKKVRVAKRSGVSIDG*