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scnpilot_p_inoc_scaffold_24462_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(86..1906)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EZD7_STRRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 599.0
  • Bit_score: 611
  • Evalue 9.50e-172
RNA-directed DNA polymerase {ECO:0000313|EMBL:ELQ84883.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rim similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 599.0
  • Bit_score: 611
  • Evalue 1.30e-171
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 602.0
  • Bit_score: 607
  • Evalue 3.00e-171

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Taxonomy

Streptomyces rimosus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1821
ATGCGTGATGCCGAAACGCTCTTGAACATCTACCACGACAGAGGCTCCCGAGGGTTGCCTCTGGAACGTGTGTACCGACAACTGTTCGACCCGGAACTCTTCCTCCGAGGCTACGGTAAGATTTACCGGAACTTCGGGGCGATGACGAAGGGGTCCACCCCCGAGACGGTGGACGGTATGTCTCTGGAGAAAATCCAGCGGATCATCGACCTGCTCCAACAGGAGAAGTACCGCTGGACGCCCGTTCGCAGGACCGAAATCCCCAAGCCGAAAGGAGGAACCAGACCACTGGGGATTCCGACGTGGAGCGACAAGTTGCTCCAAGAAGTCCTTCGACAACTCCTTGAGGCGTACTACGAGCCTCGATTCAGCGACCGCTCCCACGGCTTTCGGCCCCAAAGGGGATGCCACACGGCACTCCGAGAGGTCCAGAGGACGTGGAAGGGGACGATCTGGTTCATTGAGGGTGATATCTCCAAGTGCTTCGACAGCTTCGACCACACGGTCTTGCTGGACATCCTTCGGAGGGACATCCACGATGGTCGGCTCATTCGTCTGATCGAGGGTCTGCTCAACGCCGGGTACATGAAGGATTGGCAATGGAAGGAAACCCTCAGCGGCACGCCGCAGGGCGGTATCATCAGTCCCTTGCTCGCCAACATCTACCTGAACGAGCTTGACCAGTTCGTCGAGAACACATTGGTCCCCGCATACACGAAGGGGGGAGAACGGCAGAAGACCCGAGCGTACATGAACATCAACCCTCGCATTTGTCGTGCGAGGAAGCGAGGCGACTCTGAAGTGGTTGCCGAGCTTGTTCGTCTACGTCGGACCATCCCAAGCCGTGATCCCTTCGATCCCGAGTACCGCAGGTTGCGGTTCGTTCGGTATGCGGACGACTTCCTGTTGGGCTTCGCTGGCCCCAAGAAGGAAGCCGAGGAGATTCGAGATCGGCTGGGCGAGTTTGTGAAGAACAACCTCAAGCTCGACCTGTCGATGGAGAAGACCCTCATCACCCATGCGGTCGATGAGAAGGCAAAGTTCTTGGGATACGAGGTCACTGTCACTCGTGACTCCGACTTGTTGTCGAAGGACGGTGGCAGGCGAACGAACGGGTACATCTCCTTGAGGATGCCCGTCAGCGTCGTCCGAGGCATCGAGAGTAAGTATCGCAGGGGTGGCAAGGTGGTCCACTGGCCGTCGCTGTTGCAGGAAACGGACTACACGATCCTGCAACGGTATCAGTCGGTCCTTCGGGGCATCTACAACTACTACTGCATGGCAACCAACGTGTCCAAGCTGACCAACCGCATCAAGTGGACTCTGGAAGGTTCTCTGGTCAAGACGCTTGCTCGCAAGTTTCGGATCAGGGTCAGCCAAGTCTACGGGCGGTATCAGCGGGACGGCATCGACGGCTTGAAGATTCTTCAGGTCGTCATCAACCGACCCGACAAAGACCCGCTGGTGGCAACTTTCGGTGGCATTCACTTCAACAGGGTTCCAGACCCGCCCCATGCGTCCGACTTCAACATCGGGCAGGCATGGATGCAGCACTGCAACAGTCGTTCAGAGGTCGTTCAACGTCTCTTGGTCGGGAAGTGCGAACTCTGCGGGAACGAGGGGGATGTCGCAGTCCACCACGTCCGCAAGTTGTCCGACATCGACCGACCGGGGCGACGACCGAAGACGGATGCGGAGCGGCTCATGGCTGCCAGACGGAGGAAGACGCTCGTAGTCTGCGTGCCTTGCCATCAGGCAATTCACGGCGGGACTTACGATGGGGACTCGTTGCGGGGTTCACTGGAGAGCCGTGTGCAATGA
PROTEIN sequence
Length: 607
MRDAETLLNIYHDRGSRGLPLERVYRQLFDPELFLRGYGKIYRNFGAMTKGSTPETVDGMSLEKIQRIIDLLQQEKYRWTPVRRTEIPKPKGGTRPLGIPTWSDKLLQEVLRQLLEAYYEPRFSDRSHGFRPQRGCHTALREVQRTWKGTIWFIEGDISKCFDSFDHTVLLDILRRDIHDGRLIRLIEGLLNAGYMKDWQWKETLSGTPQGGIISPLLANIYLNELDQFVENTLVPAYTKGGERQKTRAYMNINPRICRARKRGDSEVVAELVRLRRTIPSRDPFDPEYRRLRFVRYADDFLLGFAGPKKEAEEIRDRLGEFVKNNLKLDLSMEKTLITHAVDEKAKFLGYEVTVTRDSDLLSKDGGRRTNGYISLRMPVSVVRGIESKYRRGGKVVHWPSLLQETDYTILQRYQSVLRGIYNYYCMATNVSKLTNRIKWTLEGSLVKTLARKFRIRVSQVYGRYQRDGIDGLKILQVVINRPDKDPLVATFGGIHFNRVPDPPHASDFNIGQAWMQHCNSRSEVVQRLLVGKCELCGNEGDVAVHHVRKLSDIDRPGRRPKTDAERLMAARRRKTLVVCVPCHQAIHGGTYDGDSLRGSLESRVQ*