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scnpilot_p_inoc_scaffold_26720_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..1224

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WS14_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 407.0
  • Bit_score: 809
  • Evalue 1.60e-231
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EPD42111.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia ac similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 407.0
  • Bit_score: 810
  • Evalue 1.00e-231
conjugal transfer coupling protein TraG similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 407.0
  • Bit_score: 788
  • Evalue 8.30e-226

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Taxonomy

Delftia acidovorans → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
GTGCTCTACGCAGGCGAAGACAAGACGCTGCGCGGTGTCGCCAACTTCCTCAGCGACCCGGCCTGTCCCTTCGAGCTTACCCTGCATCGGATGATGACCACGCCGCACATCGGCGATGGACCGCATCTGGTGGTGGCATCGGCAGCGCGTGAAGTCCTGAACAAATCGGACAACGAGCGTTCCGGCGTGTTGAGCACCGCCATGTCATTCCTCGGCCTGTACCGAGACCCCACGGTGGCCGAAGTCACCTCGCGCTGCGACTGGCGCATTGCCGACCTGATCGCGGCCGAGCATCCCGTGTCGCTGTATCTCGTGGTGCCGCCTTCGGACATCAGCCGCACCAAACCGCTGATCCGCCTGATCCTCAACCAAATCGGGCGGCGGCTGACGGAATCACTCGATGGCAGCGATGGCATCCAGCGCCGTCACAAGCTGTTGCTGATGCTCGATGAATTCCCGGCGCTTGGGCGCCTGGACTTCTTCGAGACGGCGCTGGCCTTCATGGCGGGCTACGGCATCCGCAGCTTCCTGATCGCGCAGTCGCTCAATCAGATCGACAAAGCCTACGGCCAGAACCATTCCATCCTCGACAACTGCCATGTGCGCGTGACGTTCGCCACCAACGACGAGCGCACGGCCAAGCGGATTTCCGAAACCCTTGGCACCGCTACCGAGCTGCGCGCGCAGCGCAACTACGCGGGACATCGACTCGCACCGTGGCTGGGGCACCTAATGGTGTCGAGACAAGAAACCGCCCGCCCGCTGCTCACGCCGGGCGAGGTGATGCAGCTGCCGCCCGATGAGGCGGTGGTGATGGTTTCCAGCGTCGCGCCGATCAAGGCCAAGAAGCTGCGCTACTACTCTGACGCGAACTTCCAGCGGCGCGTGCTGCCGCCTCCTGTACTCGTTGCGGGGCGCTACGCCGACGTGCCTCCCTTACGGCCCGACGACTGGAGCGGGCTGACGGTTCCTCCCGTTCCGGTGGCGCCTGCAACCGAAGCCGTTGAAGGCTTCCCCTCTGCCGCTGACGACGGCGGCCCGCGTCGCCAACCCGAACTCTCCGAAGCCGCCGCCTACGACCCCGACCTGGCTGCGCCTGCAGCCGACCTCGGGCTGCTCGATGACGATGACATGCAGCTTCCCCTTCCTCGCCAGCTCGACCCGGCCCTGCAGCGCACGGCCCGGCTGGCATCCCTCGACCCTGACGACGGAATCCAACTATGA
PROTEIN sequence
Length: 408
VLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHIGDGPHLVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIQRRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYSDANFQRRVLPPPVLVAGRYADVPPLRPDDWSGLTVPPVPVAPATEAVEGFPSAADDGGPRRQPELSEAAAYDPDLAAPAADLGLLDDDDMQLPLPRQLDPALQRTARLASLDPDDGIQL*