ggKbase home page

scnpilot_p_inoc_scaffold_28753_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1542..2417

Top 3 Functional Annotations

Value Algorithm Source
Mobilization protein A {ECO:0000313|EMBL:EYR79517.1}; EC=2.7.7.- {ECO:0000313|EMBL:EYR79517.1};; EC=5.99.1.2 {ECO:0000313|EMBL:EYR79517.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaprote similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 205.0
  • Bit_score: 393
  • Evalue 2.80e-106
Probable conjugal transfer protein traA n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P4E0_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 289.0
  • Bit_score: 268
  • Evalue 7.30e-69
MobA/MobL protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 199.0
  • Bit_score: 167
  • Evalue 6.50e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGCTATTTATAGCCTGCATCATCAGCCGATAGGGAAAAGCACGCAGGCGCGGCCGCACACTTCGGCCGCCCATGTGCGCTACATCACGCAGCCCTCGGCCGCGAGCCGTATCGAGGCCGGACGGATGCCCACAAGACCCCGCGATGCGGCGGCGTTCATGGTGGACGCCGAGAACGGCGACCGCAAGAACGCACGGGTGTCTGACAAACTGATGCTGGCGCTGCCCCGCGAGCTGGACGCCCAGCAGCGGGCCGAGCTGGTGCGCGGCTATGCCGAGGAGGTGACACAGGGGCGGGCACCATGGCTTGCGGCGTTCCATGACCGAGGCAAGGACGCCAACAATCCCCATGCCCATCTTCTCGTCCGCGACCGCGACCCTGCAACCGGCAAGCGCGTGGCGGGCTTGAGCGAGATGGGCAGCACCGAGCGCCTGCGCACGCTTTGGGAGAACCACGCCAACCGCGCCCTAGAGCGGGCAGGGCGGCCCGAACGCATCGACCGGCGCACGCTGGAAGCACAAGGTATCGAGCGCGCGCCGACCGTCCACGAAGGGCCGAAGGCGCAGCAGATGGAGCGGCGGGGCGGCCCCCGGCTCGGCGGCCGGTTCCGCAGGGCGTCGTCAATCAGCATCCCGTCAATACGGGCATTGTCGGCCGCAACCTCACGGGCCTGCGCGGCACGGAAGGCCAGCAAAGCGGCCTCCTCCCGTTTATCCCACCAGCCCGTGACGGCCAGAAAGCCGCGCCGCAGGGGATTGCGCGGCGAGCGGGCCATGACAAAATCCTCGAACCATCCCAACGGGCGGCCGAACAGCCAGCAAAACCCGTCGAGCAGAATATCAATCACCCGCCCATTATTGGGAATAAAAACCTAG
PROTEIN sequence
Length: 292
MAIYSLHHQPIGKSTQARPHTSAAHVRYITQPSAASRIEAGRMPTRPRDAAAFMVDAENGDRKNARVSDKLMLALPRELDAQQRAELVRGYAEEVTQGRAPWLAAFHDRGKDANNPHAHLLVRDRDPATGKRVAGLSEMGSTERLRTLWENHANRALERAGRPERIDRRTLEAQGIERAPTVHEGPKAQQMERRGGPRLGGRFRRASSISIPSIRALSAATSRACAARKASKAASSRLSHQPVTARKPRRRGLRGERAMTKSSNHPNGRPNSQQNPSSRISITRPLLGIKT*