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scnpilot_p_inoc_scaffold_26224_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(463..1017)

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ENA8_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 172.0
  • Bit_score: 175
  • Evalue 4.10e-41
Extracytoplasmic sigma factor ECF {ECO:0000313|EMBL:KFA87540.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 171.0
  • Bit_score: 178
  • Evalue 6.70e-42
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 172.0
  • Bit_score: 175
  • Evalue 1.10e-41

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCCCGAGTCGAAAGAGGTCCCGGGACCCGGGTACAACCAGTCGGCCGACGAATTGCTGCCGGAAGTCTACGCGGAGCTGCGCCGCCTGGCCGTGGCGCTGACCACCCGCCTCCGGCCGGGCCAAACGCTCCAGCCGACGGCTCTGGTCCACGAAGCCTACTTACGCCTGGTGGAGCGGAGGGGTCACGGCTGGGACGGGCGTCGCCATTTCTTCGGGGCGGCGGCCCGGGCGATGCGCGAGATCCTCATCGAGCAGGCGCGGCGCAAGGGCAGCCGGAAGCACGGCGGCGGCGCCCGGCGCATCGAGATGTCCGAGGGCATGGCCCTCATCGAGCCGCCGGCCGACGACCTGCTGGCGCTGGACGAGGCCATCGGCCGACTCCAGGCGGAGCGACCGCACCTCGCTGAAGTCGTCCTGCTGCGCTATTACACCGGCCTGAGCGTGGAGGAGACCGCCGGCGTCGTCGGCCGGTCGGTCAGCACCGTCACCCGCGATTGGCGTTTCGCCCGCGCGTGGCTCGCCGCTCGCGTAAAGTTGGAGGACGAGGGGTAA
PROTEIN sequence
Length: 185
MPESKEVPGPGYNQSADELLPEVYAELRRLAVALTTRLRPGQTLQPTALVHEAYLRLVERRGHGWDGRRHFFGAAARAMREILIEQARRKGSRKHGGGARRIEMSEGMALIEPPADDLLALDEAIGRLQAERPHLAEVVLLRYYTGLSVEETAGVVGRSVSTVTRDWRFARAWLAARVKLEDEG*