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scnpilot_p_inoc_scaffold_24111_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..395)

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase (EC:4.1.1.18) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 262
  • Evalue 5.10e-68
Lysine decarboxylase {ECO:0000313|EMBL:ACS19360.1}; EC=4.1.1.18 {ECO:0000313|EMBL:ACS19360.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 262
  • Evalue 2.50e-67
Lysine decarboxylase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CLV3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 262
  • Evalue 1.80e-67

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGAAATTCCGCTTTCCCATCGTCATCATCGACGAGGACTTCCGCTCCGAAAACACTTCGGGCCTCGGCATCCGCGCGCTCGCGCAGGCCATCGAGACGGAGGGCTTCGAGGTGCTGGGCGTCACGAGTTATGGCGACCTGAGCCAGTTCGCCCAGCAGCAAAGCCGCGCCAGCGCCTTCATTCTGTCGATCGACGATGAAGAATTCACCGTCGGCCCCGACCTCGATCCGGCCGTGCTGAGCCTGCGCAACTTCATCGGCGAGGTGCGCCGCAAGAACGCCGATGTGCCGATCTACATCTACGGCGAGACCAAGACCTCGCGCCACATCCCGAACGACATCCTGCGCGAGCTGCACGGCTTCATCCACATGTTCGAGGACACCCCCGAATTC
PROTEIN sequence
Length: 131
MKFRFPIVIIDEDFRSENTSGLGIRALAQAIETEGFEVLGVTSYGDLSQFAQQQSRASAFILSIDDEEFTVGPDLDPAVLSLRNFIGEVRRKNADVPIYIYGETKTSRHIPNDILRELHGFIHMFEDTPEF