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scnpilot_p_inoc_scaffold_27230_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1829..1999)

Top 3 Functional Annotations

Value Algorithm Source
Rubredoxin n=4 Tax=Variovorax RepID=C5CL81_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 130
  • Evalue 6.10e-28
rubredoxin-type fe(cys)4 protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 130
  • Evalue 1.70e-28
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 130
  • Evalue 8.40e-28

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGAATACGAAAACTTGGATGTGCCTGATTTGTGGGTGGATCTATGACGAAGCTGTTGGTGTACCAGAAGACGGTATCGCGGCAGGCACGGCCTGGGCCGACGTTCCGATGAACTGGACCTGTCCCGAGTGCGGTGCGCGCAAGGAAGACTTCGAAATGGTTGAAATCTGA
PROTEIN sequence
Length: 57
MNTKTWMCLICGWIYDEAVGVPEDGIAAGTAWADVPMNWTCPECGARKEDFEMVEI*