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scnpilot_p_inoc_scaffold_27234_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..2224

Top 3 Functional Annotations

Value Algorithm Source
Chloride channel protein CLC-a n=2 Tax=Arabidopsis thaliana RepID=CLCA_ARATH similarity UNIREF
DB: UNIREF100
  • Identity: 31.4
  • Coverage: 191.0
  • Bit_score: 102
  • Evalue 1.30e-18
chloride transporter, chloride channel (ClC) subfamily protein similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 182.0
  • Bit_score: 102
  • Evalue 5.50e-19
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; TaxID=3702 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunnerida similarity UNIPROT
DB: UniProtKB
  • Identity: 31.4
  • Coverage: 191.0
  • Bit_score: 102
  • Evalue 1.90e-18

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Taxonomy

Arabidopsis thaliana → Arabidopsis → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 2223
GCGGCGTCGACCGCGGCGTCGTCGTCGGCCCCCCCCGCTTTCCCGTTCGCGGTCCGCGGCGGCCCGTCGCGTGAACCCGAGGACGACTCGGTCGAGGCCATCGCCTTCCGCGCCGCGTACATGGCGCGTTCGCCGGAGGTGCTCCGCGCGGCGCACGCGCGCGCGGCGGCCCTGCGCGAGCAGCGCAAGGCGCAGCAGGCCAAGACCTTCGCGACTCTCGAAGAGGAGGCGCGGCGGCACTTCATTCAGCCGCTGGCGACCAAGCCGCTGACGCTTGAGCGCTACAAGATGCTGCTGCGCGCCAAGAACAACTCGCTCGACTACTACCCCAGCTACAACTCGCTGTACCTCAAGGCGGCAGTGTCCGAGACGTGGGCCGCGAACCAGTGGCGCATCTTCTTTAAGTGGCTGCTCGCGTTGCTGGTTGGCGTCTGCGTCGGCTTCCTGGGTTTCGCGGCCATCTTCGGCACGCGCGTGCTCAACGACATCAAGCTCGGCTGGGTGGGGTACTTCCTGCAGTCGGACAACTACTTCCTCGGCTGGCTCATCTTCACGGCCTGGAACGCGGCCTTCCTGTGCATCACGGCGGCCGTGATCAACTACCATTGCCCCATCTCGGCCTCGGGCTTGCCCGACGTGCGCGCCTTCCTCAACGGCGCCAATATCCCCACGCTCTTCACCTTCCGCGCGCTCTACTCCAAGGTCTTCATCACCGTGCTCTGCGTGGCGGCCTCGATGCCCATGGGCGTGCAGGGCCCGCTCATCCACACCGGCGCGCTCATCGGCGGCTGGCTCGCGCAGCACATGCGCACCGTAGTGCTGCGCCTGTGTTGCTGCGCGGGCCCGCGCGACGAGATCCGCGACGAGGAGGACCGACCCGTCTTCCCCTCGCACCACCCCTACTTGGACGAGCAGGACGTCCTCGCGCCGCGCTCCGCGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGCGCAGCAGCACCAGCAGCAGCGCATGGGCCGCCGCGTGCCGTCCCATCAAAACATGGCTGCCGCCGCGGGCGTCGGCGCCACCCAGGCCGCCGGCGCCGCTGCGGGCGCGCCGGGCTCTGCGCGCAAGCAGCGTCCGCGCGCGGCGGCGGCGCAGCGCGAGGGCGGCATCCAGATGAGCCTCCTGGGCGACACCGACAACGGCGACGGCGGCGACGGCGCGGGCGTCAGCAGTAGCGCCAGCGCGCGCGCGCCGCGGACCGGCGCCGTGGGCTACAGCGATGACGGCGACGATGACGACGGCGCCGCGGCCGCGCGCCGCCGCGCCGGCGGCAAGGCCAAGGGCAAGGGCGGGCACGGCCGCGCGGCCGCGCTCATCGACGCCGACAGCACCGAGGCGCTTTCGCAGCTGCCCGCAGAGCCCGCGATGGGCTCGCGCCAGCGCCAGAGCGCCAACGCCGCGTACGGCCAGCGCCGCGGCGGCGCCGTGGCCTCGGTCTCGGGCTCCGCGCAGCGCGGCGGCCCCGGCGCCGCGGGCTCTGCGGCGGGCGCTGCGGGCTCGCTGGCGACTGCGCCGGTGCGGCGGCGCGTGTCGATGAACGAGTCCGCGATGCTGAACATCGACCGCGTGAACGAGAACATGGCCGAAGTGGATCCGCAGGCGTATGCCAACGTTGACAACAGCGCCGGCACGCGCTGGGGTCTCGAGTCGGTTGACATCACGTCCTACATCGCCTCCGGCAACGCCGACGACGACGCCGGCGCCGCGGGCGAGCGCGCGCTCTTCGATGCCTCGGGCCGGCCGATCCAGGACCCGCAGGACTCTGAGCCCTCGGGACGCGGCCGCAGCGACTCGTTTTCGCTCACGCGCCTCGGCCGCAGCGGCGGCGGCGGCGCGGGCGCGGGCGGCGCAGGCAACAGCTGTGACGAGGACGAGGACGACGACGAGGACGACCATGACGAGGATGAGGACGAGGACGGTGACGAGGACGGTGACCACAGCGACTCCAAGTCCAAGCGCTCCAACAGCAAGGGCGGCCGCAGCAACAGCGTGTCCCGCTCCAAGACGCGCCCCGCGACGGCGGCGCAGCAGTCCCCCTCGCAGCAGCCGCAGGCGGCGTCGGTTGCCGGCGGGCGCGGCCAGACGCACGGCCACGGCCATGGGCACGAGGACAACGAGGAGGAGGAGGCGGGCGATCACTTCCCCGCGCTCTCGCCCGAGCCGCTGGGTTCGCGCGCCTTCTCCAGC
PROTEIN sequence
Length: 741
AASTAASSSAPPAFPFAVRGGPSREPEDDSVEAIAFRAAYMARSPEVLRAAHARAAALREQRKAQQAKTFATLEEEARRHFIQPLATKPLTLERYKMLLRAKNNSLDYYPSYNSLYLKAAVSETWAANQWRIFFKWLLALLVGVCVGFLGFAAIFGTRVLNDIKLGWVGYFLQSDNYFLGWLIFTAWNAAFLCITAAVINYHCPISASGLPDVRAFLNGANIPTLFTFRALYSKVFITVLCVAASMPMGVQGPLIHTGALIGGWLAQHMRTVVLRLCCCAGPRDEIRDEEDRPVFPSHHPYLDEQDVLAPRSALQQQQQQQQQQYAQQHQQQRMGRRVPSHQNMAAAAGVGATQAAGAAAGAPGSARKQRPRAAAAQREGGIQMSLLGDTDNGDGGDGAGVSSSASARAPRTGAVGYSDDGDDDDGAAAARRRAGGKAKGKGGHGRAAALIDADSTEALSQLPAEPAMGSRQRQSANAAYGQRRGGAVASVSGSAQRGGPGAAGSAAGAAGSLATAPVRRRVSMNESAMLNIDRVNENMAEVDPQAYANVDNSAGTRWGLESVDITSYIASGNADDDAGAAGERALFDASGRPIQDPQDSEPSGRGRSDSFSLTRLGRSGGGGAGAGGAGNSCDEDEDDDEDDHDEDEDEDGDEDGDHSDSKSKRSNSKGGRSNSVSRSKTRPATAAQQSPSQQPQAASVAGGRGQTHGHGHGHEDNEEEEAGDHFPALSPEPLGSRAFSS