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scnpilot_p_inoc_scaffold_27244_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..653)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: Werner syndrome ATP-dependent helicase homolog n=1 Tax=Fragaria vesca subsp. vesca RepID=UPI0002C305B3 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 87
  • Evalue 2.20e-14
Putative uncharacterized protein {ECO:0000313|EMBL:EEF35962.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gun similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 77.0
  • Bit_score: 86
  • Evalue 5.40e-14
ATP-dependent DNA helicase RecQ similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 77
  • Evalue 3.80e-12

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Taxonomy

Ricinus communis → Ricinus → Malpighiales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 651
ATGTCATTGTATCGCCAGTCATCTGCATCCACCTCTGTCTCTGTTGGCACTGTTGCGCATGAGCTGCCTCCCCACGTTGCAGCGCGCTTGCAAGCAGTGCTCCGTAGCACCTTCGGCTTTGCGTCTCTGAAGCCCTTCCAGATCGGCGCCGTTACGAACGCTGTGCTCGCGTACTCTCTGCCTGATATTGAGAGCGTGAATACAGGAGGACTGCATCCGACTGCAGCAATGCCCTTTCCGTTCAACAACGGCTCAAACAATGGCAGCGCGGGCGCGCCACCCACGTCATCCTTCCTTTTCCCGCTCACAAACATGGCCGGCAGCTCTGACAGCGCCAGCGAGACCGCGAGCGCGGTCGTGAGCTGCGACTTCGCCTCCGTCTCGGTGGTCCCGCGCGCGACGGGCCCCGTGACGCTGCCGCGGCACAGCTTCGTGATGCAGGCCACGGGCAGCGGCAAGTCGCTCTGCTACCAGCTGCCGCCGCTGCTAACGGGGCTCACTACGGTTGTCATCTCGCCGCTCGTGTCTCTCATGCAGGACCAGGTCGCCGGACTCAGCGCCCGCGGCGTGCGCGCGCTGTATCTCGGCCCCAGCACGCGCGCCGAGGAGCTCGACGCGCTGTACCGCGGCGGGCACTTCGCGCTCGTGTAC
PROTEIN sequence
Length: 217
MSLYRQSSASTSVSVGTVAHELPPHVAARLQAVLRSTFGFASLKPFQIGAVTNAVLAYSLPDIESVNTGGLHPTAAMPFPFNNGSNNGSAGAPPTSSFLFPLTNMAGSSDSASETASAVVSCDFASVSVVPRATGPVTLPRHSFVMQATGSGKSLCYQLPPLLTGLTTVVISPLVSLMQDQVAGLSARGVRALYLGPSTRAEELDALYRGGHFALVY