ggKbase home page

scnpilot_p_inoc_scaffold_27260_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..495)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthetic protein FliR id=12553360 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 165.0
  • Bit_score: 272
  • Evalue 2.20e-70
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 165.0
  • Bit_score: 270
  • Evalue 1.50e-69
flagellar biosynthetic protein flir similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 165.0
  • Bit_score: 264
  • Evalue 2.90e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGTTCACCTTTTCCGAAGCCCAGATCGCCGCCTGGCTCTCGCCCATCCTGTGGCCTTTTCTGCGGGTGCTGGCGGTGTTCTCGGTGGCGCCCGTGTTTTCCATGCGCGCCATTCCGGTGCGGGTGCGCATCGGCCTCGCGTTTTTCATCGCGCTGTGCGCGCAGGCGGTGCTGCAGGATCAGCCCCAGGTTCCCTTCAACGGGCCCGATGCCCTCGGGGCGGTGGCCCAGCAGGTATTGATCGGATTGGCCATAGGATTTGCCGTGCGCCTGGTCTTTGCCTCGGTGGAACTCGCCGGCGAAGTGATCGGGCTGCAGATGGGGCTCAACTTCGCCTCCTTCTTCGATCCGGCGAGCAACGCGCAGGTGAGTGCGGTGGCGCGGTTCTTCGGCCATATCGCGACCTTGTTTTTCGTCGTCATCAACGGCCACCTCATGGTGCTGATGGCGGTGGTCGAGAGCTTCGATCGTTTTCCCGTGGACAGCCACTTCTTT
PROTEIN sequence
Length: 165
MFTFSEAQIAAWLSPILWPFLRVLAVFSVAPVFSMRAIPVRVRIGLAFFIALCAQAVLQDQPQVPFNGPDALGAVAQQVLIGLAIGFAVRLVFASVELAGEVIGLQMGLNFASFFDPASNAQVSAVARFFGHIATLFFVVINGHLMVLMAVVESFDRFPVDSHFF