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scnpilot_p_inoc_scaffold_30985_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1130..1672)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MS41_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 178.0
  • Bit_score: 207
  • Evalue 1.20e-50
RNA polymerase ECF family sigma factor {ECO:0000313|EMBL:CDT17189.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 178.0
  • Bit_score: 203
  • Evalue 3.30e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 179.0
  • Bit_score: 200
  • Evalue 3.30e-49

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGGATGACTTTTATATTGATAAAGTTCGTTCGGGAGATATTCAGGCATTCAGGTATTTTGTAAAAGAATATAAGGATATGGCTTTTTCTGCAGCCATGTCCATAGTGAAAGATGAATTTGTGGCAGAAGAAGTAGTTCAGGATGCTTTTCTAAAAGCATTCAAAGCATTGGCCTCATTTAATAAAAAATCGAAGTTCAGCACATGGTTTTACAGGATTGTATTGAATGAGGGACTGGCAAAAATGAATAAAATGAAGAAGGATTATGTTTCATTTATAGAAAATTACGATGAAGAAATTATGGATGAAAGCGCCCTGCTGGCTTTAGAAGCAGACGAACAATCGTACCTCGTTAATACTGCACTAGCCCAACTTCCCCCAAAAGAAAGCGTGGCGCTACGGCTTTTTTATCTTCAGGAAGAAAGTATCAAAGAGGTATGTGCTATTACCGGGTGGACAGAAGCCAACACACGGGTTATATTGCACAGGGCGCGCAAGAATATGTTGAAACTTGTAAACTCAATATTTAAAAAAGAATTTTAA
PROTEIN sequence
Length: 181
MDDFYIDKVRSGDIQAFRYFVKEYKDMAFSAAMSIVKDEFVAEEVVQDAFLKAFKALASFNKKSKFSTWFYRIVLNEGLAKMNKMKKDYVSFIENYDEEIMDESALLALEADEQSYLVNTALAQLPPKESVALRLFYLQEESIKEVCAITGWTEANTRVILHRARKNMLKLVNSIFKKEF*