ggKbase home page

scnpilot_p_inoc_scaffold_31213_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2462..3343)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000361E3C3 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 301.0
  • Bit_score: 290
  • Evalue 1.80e-75
Phage integrase family protein {ECO:0000313|EMBL:EZP57464.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 302.0
  • Bit_score: 287
  • Evalue 1.60e-74
putative Integrase similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 277.0
  • Bit_score: 113
  • Evalue 1.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GCCGGCGAGCCCGAGAAAGGCATCAATCCCTATTCGCGGAATACGCTCGACAATGATCTGCGTTATGTCGCGATGTTCGAAGACCCCGACTTCATCTACGAGAACCAGAAAACGAAGAAGCGCACCCCTGTGCGCGACCTCGATGTGAAGGGCATCCGGCCGGTTCATATCCACGAGCTCCGCGACGGGCTCGCCGAAACCCCGGGCAAGGCGAACAACTGGCTCAATGTCCTGAAGCTCATGTTGACCTTCGCGACCGAGCGCGACTGGCGCGCCGACAATCCGGCCAGCGATATCGCGCCGCTGCCGCTCGGCGAGCACGAACCTTGGCCCGCCGATGTCCTCTTGCAGGCGAAGGACGAGGCCTCGCCGATGGTATGGCTCGCGATCGTCACCGGCCTTTGCAGCGGGCAGCGGATCAGCGATGCGATTCGCATCCACCGCAGCTGGCTGAAGACCGGCATCATGCAGCTGTCGCAGTTCAAGACCGACGTCGACGTTGCCGTGCCGGTGCACCCGTGGTGGCGCGAGGAGATCGACAAGATGCCCGCGCGCGCTGTCGAGGCCGTGACGGTGCTCTATGACCGCACCGGCAAGCCCTTCACCAGCGAGGAGGCTATCCAGTCGCGCATTCGGGCCATGATGAAGAAGCTCGGCCACGTCGATGCGAACGGCAAGGCGCTCTACACCTATCATGGCCTGCGCAAGAACGCCTGCTGCTACCTCCTCGAAACCGGGCTCAGCGACACCGACGTCGGCGCGATCCTCGGCATGACGCCCGAGACGGTGCGCCACTACGGCAAGCGCGCCCGCGCGCTGACGATCGCCCAGGGCGCCGCCGAGAAGATGACGGCGGTGCCCTTCTCGAAGATGGGACGGTGA
PROTEIN sequence
Length: 294
AGEPEKGINPYSRNTLDNDLRYVAMFEDPDFIYENQKTKKRTPVRDLDVKGIRPVHIHELRDGLAETPGKANNWLNVLKLMLTFATERDWRADNPASDIAPLPLGEHEPWPADVLLQAKDEASPMVWLAIVTGLCSGQRISDAIRIHRSWLKTGIMQLSQFKTDVDVAVPVHPWWREEIDKMPARAVEAVTVLYDRTGKPFTSEEAIQSRIRAMMKKLGHVDANGKALYTYHGLRKNACCYLLETGLSDTDVGAILGMTPETVRHYGKRARALTIAQGAAEKMTAVPFSKMGR*