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scnpilot_p_inoc_scaffold_27585_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1723..2202

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Variovorax paradoxus RepID=UPI000380218E similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 158.0
  • Bit_score: 218
  • Evalue 3.60e-54
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 158.0
  • Bit_score: 217
  • Evalue 2.30e-54
Integrase family protein {ECO:0000313|EMBL:ACS18929.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 158.0
  • Bit_score: 217
  • Evalue 1.10e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCTCTCACAGACACATTCGTTCGGCAGGTAAAACACACTGGCAAGGCAAGTGGCGACAAGTACGCGGATGGCGGGGGTATGTACCTGTTGGTCAAGGCTGGAGGCAGGTACTGGCGCATGGACTACGCCCATGCAGAAAAGCGCAAGACACTCGCGTTGGGGGTGTATCCCGAGGTTTCGCTAGCAAAGGCTCGCCAGCGGCGCACCGAGGCTCGCGAGTTGCTGGCTGAAGGGCTCGACCCGGGCGTTGCTAAGCGGGCAGAAAAGTTGGCGACGCGCGTGGCAGCGGCCAACACGTTTGAGGCTGTAGCCCGCGAATTCCATGCCACCCAGGCAAGCGGCTGGAGCCCTCGCTACGCTTCCCGCTGGATTGAACGTATGGAAAACGACCTGTTCCCCCACATCGGCAATCTGACGCTCCCTTCTATCACAGCCCCAGTGCTCCTCGACGCGCTGCGCAAGGTGGAGAAGCGCGGG
PROTEIN sequence
Length: 160
MALTDTFVRQVKHTGKASGDKYADGGGMYLLVKAGGRYWRMDYAHAEKRKTLALGVYPEVSLAKARQRRTEARELLAEGLDPGVAKRAEKLATRVAAANTFEAVAREFHATQASGWSPRYASRWIERMENDLFPHIGNLTLPSITAPVLLDALRKVEKRG