ggKbase home page

scnpilot_p_inoc_scaffold_29105_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 512..1078

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A965_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 312
  • Evalue 3.70e-82
  • rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 188.0
  • Bit_score: 354
  • Evalue 7.00e-95
50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 312
  • Evalue 1.00e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGCTGAAGCTCAGCAGGCGGCTCTCTCGCCGCGCATGAAGAAGCATTACGAGGACGTCGTCCGTCCCGCGATGATCAAGGAATTCGGCTACAAGAACGCCATGGAAGTGCCGACGATCGAGAAGATCGTCATCAACATGGGTGTTGGCGAGGCGACGGCGGACCGCAAGAAGGTCGACAACGCCGCGGGCGATCTCGCCCTCATCGCCGGCCAGAAGCCGATCATCACCAAGTCCCGCCTGGCCATCGCCGGCTTCAAGCTGCGCGAGAACATGCCGGTGGGCTGCAAGGTCACGCTGCGCAAGACGCGGATGTACGAGTTCGTCGACCGGCTCGTCACCATCGCGCTTCCGCGGGTGCGCGACTTCCGGGGCCTGAACCCGAAGTCGTTCGACGGGCGCGGCAATTTCGCGCTCGGGATCAAGGAGCACATCGTGTTCCCCGAGATCAACTACGACAAGGTCGACCAGGTCCTGGGCATGGACGTGATCGTCTGCACGACTGCGAAGTCGGACGACGAGGCGCGCGCCCTGCTCAAGCACTTCAACTTCCCGTTCCGGCAGTGA
PROTEIN sequence
Length: 189
MAEAQQAALSPRMKKHYEDVVRPAMIKEFGYKNAMEVPTIEKIVINMGVGEATADRKKVDNAAGDLALIAGQKPIITKSRLAIAGFKLRENMPVGCKVTLRKTRMYEFVDRLVTIALPRVRDFRGLNPKSFDGRGNFALGIKEHIVFPEINYDKVDQVLGMDVIVCTTAKSDDEARALLKHFNFPFRQ*