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scnpilot_p_inoc_scaffold_29257_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..388)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 128.0
  • Bit_score: 151
  • Evalue 1.10e-33
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003641697 similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 179
  • Evalue 2.60e-42
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 129.0
  • Bit_score: 143
  • Evalue 4.40e-32

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Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGACGACCTTCAGGACGACGGCCAGGATGACGGCGAGGAAATCGTCGACCTCGTGGTCGAGCCGGAGGCGACAGGCAGGCGCCTCGATGCCTGGCTCGCGTCCCGGATCGACACGCTGAGCCGCAGCCGCATCAAGGCATTGATCGAGAGCGGCCATGTCGCCATCGGCGGCGCGACCATAGTCGAGGCGAAAAAGCCGGTCAATTCGGGCGATGTCGTCCAGCTCTCGGTCCCCGAAGCCGAGCCGGCCGAGCCCGAGGCCGAGGACATCCCGCTCGACATCGTCTTCGAGGACGATGCGCTGGTGGTGGTCGACAAGCCGGCGGGCCTCGTCGTGCATCCGGGTGCCGGCAACTGGACCGGCACGCTGGTCAACGCGCTCATC
PROTEIN sequence
Length: 129
MDDLQDDGQDDGEEIVDLVVEPEATGRRLDAWLASRIDTLSRSRIKALIESGHVAIGGATIVEAKKPVNSGDVVQLSVPEAEPAEPEAEDIPLDIVFEDDALVVVDKPAGLVVHPGAGNWTGTLVNALI