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scnpilot_p_inoc_scaffold_27985_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 497..1753

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase n=1 Tax=Variovorax paradoxus RepID=UPI000370D294 similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 386.0
  • Bit_score: 651
  • Evalue 5.70e-184
spermidine synthase similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 386.0
  • Bit_score: 650
  • Evalue 2.80e-184
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=54 similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 386.0
  • Bit_score: 650
  • Evalue 1.40e-183

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
TTGACGAGCGGGACGGAGGCGATATCCTGCGCCTTCGTCGCGGTGATTTCACTGACCGACGGAGCCGACGACTCGCGGTCCGCCGATGCACCGGTCGGGCTGGAGATTCCGCTCGTGATGCGCATCCTCAAGCGCAACGTGGCCTTGAAGGACCTGGTCTCGCAGGTGCTGACCTTCGACTACCTGGGCGCGCTGGCGGTGTCGCTGGCCTTTCCGCTGCTGCTGGTGCCGCAGCTCGGGCTGATCCGCACGGGGCTGTTGTTCGGCCTGCTCAACGCGCTGGTGGCGGTGTGGGCGCTGTGGCTGTTCCGCTGGGAGCTGCGGCGCTTCGGCGCGCACGCCGCCGCCTGCGTGCTGGTGCTGTGCCTGCTCGGGGCGGCGCTGGCCGGGGCCGGGCACATCACCACCCTGGCCGAAGACAAGTTCTACCAGGACCGCGTCGTCTTCACGGCCACCTCGCCCTACCAGCGCATCGTGGTCACCCAGGGCGCACTCGGCCACCGCCTGTTCCTCAATGGCAACCTGCAGTTCGCCGAGCACGACGAGTACCGCTACCACGAGGCGCTGGTGCACCCGGCCATGGCGGCGCAGGGCGCGCCCAAAAGCGTGGCGGTGCTGGGCGGCGGCGACGGCATGGCGGTGCGCGAAATTCTCAAATACCCCTCTGTGGAATCGGTCACGCTGGTCGAGCTCGACCCGGCGATGACGCAGCTGTTCACCGACGACCCCGCGCTCGCCGCCCTGAACGGCCGCGCGCTGTCGGACCCGCGCGTGCGCGTCGTCCACCAGGACGCCTTCCAGTGGCTGCAGCAGGAGGTGGGATTTTTTGATGTGGTGGTGGTCGATTTCCCCGACCCGACCAACTTCGGCATCGGCAAGCTCTACACCAACAGCTTCTATTCCCTGCTGGAAAAGCGCCTGGCGGCGAGCGGCTACGCCGTCATCCAGACCACCTCGCCGCTGGTCGCGCGCCACAGCTTCTGGACGGTGGTGCAGACGGTGGAATCGGTCGGCCTGACCGCCACGCCCTACCACGCGCATGTGCCGAGCTTTGGCGAATGGGGCTTCGTGCTGGCCAGCCGCCGGCCCTGGCGCCTGCCCGAGGCGCTGCCCGAGGGCCTGCGCTTCCTCTCGCTGCCGACGCTGCCGCTGCTGTTCGACTTCCCGCTCGACATGGCGCGCGTGCCGGCCGAGGTGCAGCGCCTGTCCAACCAGGTGCTGGTGACGACGTATGAGCGGGAGTGGGGAAAACATTGA
PROTEIN sequence
Length: 419
LTSGTEAISCAFVAVISLTDGADDSRSADAPVGLEIPLVMRILKRNVALKDLVSQVLTFDYLGALAVSLAFPLLLVPQLGLIRTGLLFGLLNALVAVWALWLFRWELRRFGAHAAACVLVLCLLGAALAGAGHITTLAEDKFYQDRVVFTATSPYQRIVVTQGALGHRLFLNGNLQFAEHDEYRYHEALVHPAMAAQGAPKSVAVLGGGDGMAVREILKYPSVESVTLVELDPAMTQLFTDDPALAALNGRALSDPRVRVVHQDAFQWLQQEVGFFDVVVVDFPDPTNFGIGKLYTNSFYSLLEKRLAASGYAVIQTTSPLVARHSFWTVVQTVESVGLTATPYHAHVPSFGEWGFVLASRRPWRLPEALPEGLRFLSLPTLPLLFDFPLDMARVPAEVQRLSNQVLVTTYEREWGKH*