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scnpilot_p_inoc_scaffold_29405_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(599..1465)

Top 3 Functional Annotations

Value Algorithm Source
Mechanosensitive ion channel protein n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DV64_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 272.0
  • Bit_score: 192
  • Evalue 5.00e-46
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:KFC66303.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 273.0
  • Bit_score: 257
  • Evalue 1.80e-65
mscS; small-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 274.0
  • Bit_score: 184
  • Evalue 3.90e-44

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGCACCTTCCCTTTTCGCTTGAGAACCCAGCCACCTGGACCGGCTTCCTGCTGCCGATTCTCGGTGCCGCCGCCGCCCTGGCGGTGGGGATTTTCGTGGCCGGACTGGCGCAGCACGCGGTGCGCTCGTGGCTGCCGCGCATCGGCGCCCCCTCGATGGTCACCCTGGCGCCATTGCTCGGCCAGACGGTGCGCTACGCCATCCTGATCGTCGCGGCGATCACCGCGCTCGGCTTCGTCGGCGTGCCCACGACCTCGATCCTCACGGTGATCGGCACCACCTCGCTGGCCCTGGCGCTGGCGCTGCAGAGCACCCTCAGCAACGTCGCCGCCGGCATCATGCTCGCCTGGATTCGCCCGGTGGCGGTGGGCGAATACATCAAGGGCGACGGCGTCGAGGGCGAAGTGGTTGAGATCGGCCTGTTCGGCACGCGGCTGCGCTCGACCAGCGGGCTCTACGTCTTCACCAACAACAACCGGCTGTGGAACGGCCCCATCACCAACCACAGCCGCGAGCCGCATCGACGCATCGACGTCGACGTCACCATCCCCGATTCCGCCAATATCAGCCGCGCCCGCAAGACCCTGCTGGCCATCGCCGCGCACGACAGGCGCGTGCTGCCCGACCCGGAGGCGACGGTGTTCGTCGACGGCTTCGGCACCGCCACGGTGACGCTCAAGATGCGCGTCTGGGTGAAGACGCCGAACTACCGCACCGTGCTGCGCGACCTAACCGAGGCGGCCAAGCTCGGCATCAACCGCATGCTGGCCGAAGGCGACGGCGGCGTCGCCGAGGTGAAGGAAGCCTCCGACCCGCACGTGGCACTCACCGGCACGCAGGCCCCGGACCTGCCGGCCAGCAAATAG
PROTEIN sequence
Length: 289
MHLPFSLENPATWTGFLLPILGAAAALAVGIFVAGLAQHAVRSWLPRIGAPSMVTLAPLLGQTVRYAILIVAAITALGFVGVPTTSILTVIGTTSLALALALQSTLSNVAAGIMLAWIRPVAVGEYIKGDGVEGEVVEIGLFGTRLRSTSGLYVFTNNNRLWNGPITNHSREPHRRIDVDVTIPDSANISRARKTLLAIAAHDRRVLPDPEATVFVDGFGTATVTLKMRVWVKTPNYRTVLRDLTEAAKLGINRMLAEGDGGVAEVKEASDPHVALTGTQAPDLPASK*