ggKbase home page

scnpilot_p_inoc_scaffold_29577_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 1..405

Top 3 Functional Annotations

Value Algorithm Source
mechanosensitive ion channel family protein; K03442 small conductance mechanosensitive channel id=12496189 bin=THIO_MID species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 135.0
  • Bit_score: 248
  • Evalue 4.70e-63
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 132.0
  • Bit_score: 225
  • Evalue 1.20e-56
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ABK99231.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobac similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 132.0
  • Bit_score: 225
  • Evalue 6.00e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pelobacter propionicus → Pelobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GAAATCGGCCTGTTCGCCACCGGCCTCGACACCCCGGACAACGTGTTCACCATCGTCGGCAACGGCAAGATCTTCGGCGACACCATCCAGAATTTCAGCACCAACGCCTTCCGCCGCGTTGAGCTGAAATGCCAGCTCGCAGGCAGCGCCGACCACGTCGCCGCCATGCAGCTGCTGCGCGACAAGCTGCAGGCGATTCCCAACGTGCTGGCCGAGCCGGCGGTGGAGGTCGAAATCCTCGAATTCAACCTGGTCGGCCCGGTGCTGGCGGTACGCCCGTTCTGCCATACCGACCATTACTGGCAGGTGTATTTCGACGGCAACCGCGTCATCCGCGAAGCGCTCGCCGAGGCCGGCTTCCCGGCGCCGATGCCGGCCCAGCTGATGCTCACCCGCGCGGCTTGA
PROTEIN sequence
Length: 135
EIGLFATGLDTPDNVFTIVGNGKIFGDTIQNFSTNAFRRVELKCQLAGSADHVAAMQLLRDKLQAIPNVLAEPAVEVEILEFNLVGPVLAVRPFCHTDHYWQVYFDGNRVIREALAEAGFPAPMPAQLMLTRAA*