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scnpilot_p_inoc_scaffold_33383_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..1891)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit 2; EC=2.7.7.6;; TaxID=561445 species="Viruses; dsDNA viruses, no RNA stage; Asfarviridae; Asfivirus.;" source="African swine fever virus (isolate Pig/Kenya/KEN-50/1 similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 537.0
  • Bit_score: 455
  • Evalue 1.30e-124
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 506.0
  • Bit_score: 195
  • Evalue 3.70e-47
DNA-directed RNA polymerase subunit 2 n=1 Tax=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) RepID=RPB2_ASFK5 similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 537.0
  • Bit_score: 455
  • Evalue 9.10e-125
  • rbh

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Taxonomy

African swine fever virus → Asfivirus → Viruses

Sequences

DNA sequence
Length: 1890
CCATTTAGCAAAGTTAACCTCGCGGAAGCGGTGAAATCAGCTATTAAGCCCAAGGATCTTGAGCAATTGTTGGTTCAATCCATCACTTCAGGCGACAAAACGATTACTGTTAAGCGCACTGAAGTTATTAATCGTATGGCTTCTCAACAAGTTTATCGTAAAAATAATGGTAATTTAATTTCAGTATTAAACACCATTACTACACCAAATACATCTGCGGGCAACAAGCAAACTGAACGTGCCGATGCAATGAGACGTGTGCATCCCACCTATCTAGGTGTTATTGACGTTACACAATCTGCCGATACTGGTGAGAAAGTGGGTGTCAATAAACAAAAGGCATGCACGGCTGTTATAACTGGCGCTAGCAATTCCTATGCGCTTAAAAAGACCCTGTTAGATGACTCTGGCGTTATTCCATTGGAAAATGTGGCGCCAAGTGATATAACTAAACGTAAACTTGCAAAGGTGTTTGTTAACGGCGACTGGATTGGTTGCTGTGAGAAAGCACATGAACTTGCACGTAAATACCGTATGTTGCGTCGTGAGGGTAAAATAGATCCTTGGATCAGTATTGTTTGGGAACCATTAATTCGAGAAGTTGGTTTCTGGTGCGATGCTGGTAGAATCATTCGTCCATTGGTTATTGTTTACAACAATATTGAAGAATACATGACCGCCTGGCGAAACAAGGACATGAGTGTTGAATTCAAGCAATGGGTCAAGTTTGACAAGGCTACAGCCGAAAAGCTGCGTCGTGGTGAGGTTACGATGCGCGACCTACGCGATCAAGGCTACATTGAGTATATTAGTGCCGAAGAACAAGAAAATGCACTACTGGCACGTAATATCAATGTATTGCGTAAACATCAAAATGATGTTACTTATCAATTTACCCATTGTGATATTGATCAAGCAATTGTAGGTATGATGACTCTAGCGGCTCCATTAGCAAATCACAGCAATGCAGTTAGAAACACATATTACACCAATCATCGTAAACAATCCACTGGTTGGTTTGCGCTTAATTGGCCATATCGTATTGATAAAAACACATTCCTGCAATATTATTGCGAAACGCCAATTGTGCGCACCTTTAGTGACAACTTTACATACCCCAATGGCACTAATTGTATTGTCGCGTTGTGCGTGTATAGTGGATATAATCAAGAAGACAGCATTATTGCAAATCAGACTAGTGTAAATCGTGGTATGATGAATGGTTCACGATTTAACTTTGAACGCACTGAATTGGCCGAAAAGGAACGTTTTGGAAATCCTGATTTTGCGCGTACAATGGATATCAAGCGTGATGCTAGTTATGAAAAGATTGAAAATGGTGTTATTAAGGAAGGTAGTGTTGTTGTCAAAGGTGATGTGCTGATTGTTAAAACACTACAATTACAAAAACCTGCTGAAAAGGATAAATCAATCTATGTGGATAGGAGTATAGTATATAAATACGAACAACCCGCTTATGTTGATCGGGTTATTATTTCACGTAACGCTGATGATATACAAATGTGTAAGGTGAAATTAAGAGAATCTCGCCCATTAATTGTTGGCGATAAATGCTGTCTTACGCCTGATCATGAAGTATTAACTCAACGTGGATGGATGCCCATAGCTGATGTGACACTCAATGATCAAGTGGCTTGTTTAGACGCCAACCACAACCTTGTATATAATCGACCAAGTGAACTTCACCGTTACCCTCACACTGGTTTGATGTATGAAATTGACAATGCGCAAATTTCTCAAAAAGTTACATTGAATCATCGTATGTATGTCAAGAAACGTCATTCAAATCAATATCAATTCATCACAGCTGATAAAGTATACGGTAAACGCGTACAATATAAAAAGAATGCTGTATGGGAAGGAGTTGAA
PROTEIN sequence
Length: 630
PFSKVNLAEAVKSAIKPKDLEQLLVQSITSGDKTITVKRTEVINRMASQQVYRKNNGNLISVLNTITTPNTSAGNKQTERADAMRRVHPTYLGVIDVTQSADTGEKVGVNKQKACTAVITGASNSYALKKTLLDDSGVIPLENVAPSDITKRKLAKVFVNGDWIGCCEKAHELARKYRMLRREGKIDPWISIVWEPLIREVGFWCDAGRIIRPLVIVYNNIEEYMTAWRNKDMSVEFKQWVKFDKATAEKLRRGEVTMRDLRDQGYIEYISAEEQENALLARNINVLRKHQNDVTYQFTHCDIDQAIVGMMTLAAPLANHSNAVRNTYYTNHRKQSTGWFALNWPYRIDKNTFLQYYCETPIVRTFSDNFTYPNGTNCIVALCVYSGYNQEDSIIANQTSVNRGMMNGSRFNFERTELAEKERFGNPDFARTMDIKRDASYEKIENGVIKEGSVVVKGDVLIVKTLQLQKPAEKDKSIYVDRSIVYKYEQPAYVDRVIISRNADDIQMCKVKLRESRPLIVGDKCCLTPDHEVLTQRGWMPIADVTLNDQVACLDANHNLVYNRPSELHRYPHTGLMYEIDNAQISQKVTLNHRMYVKKRHSNQYQFITADKVYGKRVQYKKNAVWEGVE