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scnpilot_p_inoc_scaffold_32597_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(823..1296)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 154.0
  • Bit_score: 226
  • Evalue 3.10e-56
plasmid stabilization protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037A7468 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 153.0
  • Bit_score: 229
  • Evalue 2.70e-57
plasmid stability protein similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 154.0
  • Bit_score: 226
  • Evalue 6.30e-57

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
TTGAAAGGCTGGCTTCTCGACACCAACGTCGTCGCCGCGCTGATCAATCCCAATGGTGCGCCGTCCGTCAAGGGATGGGCGCGCGACCAGCGCGAGGACAGCTTCTTCATCAGCATCCTGACGCTGGCCGAATACGACAAGGGGATTTTCAACCTAGCGCCCAATCATCCCGACCGGCCGAGATACAAGGCCGCCCGCGACGCCCTGGCGCACCGGTTCGAGGATCGGATGCTTGGCGTCAGCAACCCGGTCGTGCTGGCCTGGGGGCGGATGTCGGGAGAGATCAGGCGGGCGAGCGGTCATCCGCCGCCGGTGATCGACACGCTGCTGGCGGCGACCGCGATCGAGCACGATCTTTATCTTGTGACACGCAACACCAAGGATGTCAGCGCGACCGGCGCGGTGGTGTTCGATCCGTGGACTGATGATCCGGAACGGTTCCCGGTTCGATCCACCGGAAAAAGATTGCGGTGA
PROTEIN sequence
Length: 158
LKGWLLDTNVVAALINPNGAPSVKGWARDQREDSFFISILTLAEYDKGIFNLAPNHPDRPRYKAARDALAHRFEDRMLGVSNPVVLAWGRMSGEIRRASGHPPPVIDTLLAATAIEHDLYLVTRNTKDVSATGAVVFDPWTDDPERFPVRSTGKRLR*