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scnpilot_p_inoc_scaffold_35043_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3..800

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361F65A similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 265.0
  • Bit_score: 513
  • Evalue 1.50e-142
  • rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGD92416.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 266.0
  • Bit_score: 396
  • Evalue 3.90e-107
extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 265.0
  • Bit_score: 342
  • Evalue 1.30e-91

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
TCGGACTTCGACGTGGTCTACATCGACAACTCGCTCGCCTCGCAGCTCAAGAACGAGAAGCTGCTGGAGACCATCGACAAGAGCAAGCTTGCCAACGCCGCCGAGGTGTCGCCGCGCGCGCTCGACAAGGACGGCCAGTACGTGGTGTTCATGACCGGCGCCACCGTCATCGTGTACGACACCAAGCAGATCAAGACGCCGCCCACTTCGTGGGCCGACCTCGCCAAGCCCGAATACGACGGCCGCCTCGCCATCGGCGACATCAGCGGCACCTCGGGCTCGCAGTTCCTCATGGCGCTGAACCGCATGAAGGGCGGCACGCTCGCGAACATGGATGCGGGCTTCGCCGCCATCAAGCCGATCGCGAAGTCTTCCGTCACGCTCTACACACAGGCCGACCAGATCGTCTCGCTGTTCGAGCGCCAGGAGATCGCGGCCGCCGTGTGGTACCCCGACCGCGCCGGCTCCGCCATCGACAAGGGCCTGCCGCTGGCCATCGTCTACCCCAAGGAAGGCGCGGTGGGCATCCTGCCCGCGCTGGTGATTCCGAAGGGCGCCAAGTCGCCGGCGCTCGCGCTCAAGTACATCGACGAAGTGCTGTCGAAGGAGGGCCAGACCTGCTTCGCCGAGCGCAAGTACGCGGGCCCCGTGAACACGCAGGTCAAGCTCAGCGACAAGGCCGCGAAGATCGTTCCTTATCAGCAGACGTTCGACAACCTCTGGCTGCCCGACCCCGAGGCCGTGGCCAAGTCGCTGCCCGAGTGGACCAAGCGCTGGCAGCGCGAAGTCGCACGCTGA
PROTEIN sequence
Length: 266
SDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRALDKDGQYVVFMTGATVIVYDTKQIKTPPTSWADLAKPEYDGRLAIGDISGTSGSQFLMALNRMKGGTLANMDAGFAAIKPIAKSSVTLYTQADQIVSLFERQEIAAAVWYPDRAGSAIDKGLPLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKEGQTCFAERKYAGPVNTQVKLSDKAAKIVPYQQTFDNLWLPDPEAVAKSLPEWTKRWQREVAR*