ggKbase home page

scnpilot_p_inoc_scaffold_35771_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..1790)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKU6_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 596.0
  • Bit_score: 807
  • Evalue 6.80e-231
  • rbh
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 596.0
  • Bit_score: 807
  • Evalue 1.90e-231
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS68639.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 596.0
  • Bit_score: 807
  • Evalue 9.60e-231

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xanthobacter autotrophicus → Xanthobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
GCCTGCGCCACCTGCCATCAGAATGAGTTCGATGCCTGGAAGGGCTCCGACCATGCGCATGCGATGATGGTCGCGACACCGGAGACCGTCGCCGGCGATTTCTCGGGCGTGACGGCCGAGCATCTCGGATCGAAGGCGCGCTTCTATCGCGACGGCGACCGCTTCATGGTCGAGACCGAGGGCAAGGACGGCGCGCCGCACGCCTTCGCGGTCAGCCACACCTTCGGCATCTATCCGCTGCAGCAATATCTCGTGACCTTCCCCGACGGCCGGCTGCAGGCGCTTCCCTTCGCCTGGGACACGCGTGCGAAGGCAGAGGGTGGCCAGCGCTGGTTCCACCTCTACCAGGACCAGTCGATCCCGGCCTCGGATCCGCTGCACTGGACGCGCGGCCAGCAGAACTGGAACTATATGTGCGCCGAATGCCATGTGACGGCGATCGGCAAGGGCTATGACGCAGCCAAGGACGCGTTCGATACGACCTTCTCCGAGATCAGCGTCGGCTGCGAGAGCTGCCACGGCGCCGGCGCCGCGCATGTCGCCTGGGCGAAGGCTGGCGCGAGCAAGACGGTTCCGCATGCGGGCTTTGCGAGCGTCGCCGCCAGCCGCCCGGCCCCGGACTGGACGCCCGACCCGGCCACGGGCAGCCCGGCGCATGGCGTCTCGCGGCCGGCCGGCGACATGGTGGAGACCTGCGCCCGCTGCCATTCGCGGCGCGGCACGCTGTCGGAAGACTGGCATCCCGGCCAGTCGATCGCCGAGACGCATCGCGAGTCGCTGATCGCGCCCGATCTCTTCTTCGATGACGGGCAGATGAAGGACGAGGTCTTCAACGACCAGGCCTTCAAGCAGAGCCTCATGTATGCGCGCGGCGTCGTCTGCACCGATTGCCACGACGCCCATAGCGAGCGGCTGAAGGCAGAGGGAGCGGCGGTGTGCAGCCAGTGCCATATGCCGGAAAAGTTCGCCACCGAGGCGCATAGCGGCCATCCGGCGCGACCGGGCGCGCCGGACTGCATCTCCTGCCACATGCCGGCGCGGACCTATATGGTCGTCGACCAGCGCCATGATCACTCCTTCCGCATTCCGCGCCCCGATCTTTCGGTGCGCCTCGGCACGCCCAATGCCTGCAACGCCTGCCATGCCGACAAGACCGCCGCATGGGCGGCGGCGGCCGTGGAGCGCTGGCACGGTCCGGAGCGCAAGGGCTTCCAGACCTGGGGCGAGGCCTTCCATCTCGCGCGGCAGGGCGATCCGGCGGCGCGGGCGAAGCTGATCGCACTCGCAACGACCGCCACGGTGCCGGGGATCGCCCGCGCCACCGCGATCTCGGAATTGCAGCGCTTCCCCTCCGCCGCGACGGCGTCGGCGGTGACGGGTGCTCTCGCCGATCCCGATCCTCTGGTGCGGGCGACGGCGGTGGACGGGTTCGGCGACCGGCCGATCGAGGAGCGCTGGCAGCTGGCCGGGCCGCTGCTCGCCGATCCGGTCCTGCTCGTCCGCGTGGCAGCCGCCGCGCTGCTCGCCGACCTGCCGCTGGAGCGCGTTCCGCCCGAGGACCGCGCCACGGCCGAGGCGTCGTTCGCCGACTATGAGACAACGCAGCGGCTCGATGCCGATCGGCCGGAGGGCCGCGCCAATCTCGCCGGCTTCCTCGCCCGGCGCGGCGACACCGCCGGCGCGGAAGCGGAACTGAAGGCGGGCTTGAAGCTGGAGCCTACCGCGGCCGGCCTTTCGGTCAATCTCGCCGATCTCTATCGCGCGCTCGGCCGCGAAAGCGAGGCGGAG
PROTEIN sequence
Length: 596
ACATCHQNEFDAWKGSDHAHAMMVATPETVAGDFSGVTAEHLGSKARFYRDGDRFMVETEGKDGAPHAFAVSHTFGIYPLQQYLVTFPDGRLQALPFAWDTRAKAEGGQRWFHLYQDQSIPASDPLHWTRGQQNWNYMCAECHVTAIGKGYDAAKDAFDTTFSEISVGCESCHGAGAAHVAWAKAGASKTVPHAGFASVAASRPAPDWTPDPATGSPAHGVSRPAGDMVETCARCHSRRGTLSEDWHPGQSIAETHRESLIAPDLFFDDGQMKDEVFNDQAFKQSLMYARGVVCTDCHDAHSERLKAEGAAVCSQCHMPEKFATEAHSGHPARPGAPDCISCHMPARTYMVVDQRHDHSFRIPRPDLSVRLGTPNACNACHADKTAAWAAAAVERWHGPERKGFQTWGEAFHLARQGDPAARAKLIALATTATVPGIARATAISELQRFPSAATASAVTGALADPDPLVRATAVDGFGDRPIEERWQLAGPLLADPVLLVRVAAAALLADLPLERVPPEDRATAEASFADYETTQRLDADRPEGRANLAGFLARRGDTAGAEAELKAGLKLEPTAAGLSVNLADLYRALGRESEAE