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scnpilot_p_inoc_scaffold_35971_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1752..2114)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5L1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 115.0
  • Bit_score: 218
  • Evalue 2.70e-54
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EYR81770.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 115.0
  • Bit_score: 217
  • Evalue 1.10e-53
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 110.0
  • Bit_score: 168
  • Evalue 9.10e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
GTGAACAGGCTCATCGACCGTGCCGAGGGCGAGCGTGTCATTCTCATCGACGGTATCGCCATGTCGATGGACGATTGTCCGGTACGCGATGTGCTGGACAGTGTCGGCGGAAAGTGGACGTCGCTGATGATCCTCGGCCTTGCCGATGGGCCGCGCCGCTTTTCGCAGTTGCGCCGCTTCATTCCCGATATTTCGCAGCGCATGTTGACCCAGACGCTGCGCGACCTGCAGCGCGACGGCTATCTCACCCGCACGGTCTACCCCACTCAGCCGCCAAGCGTTGAATATTGCCTGACGCCCCTCGGCCATTCCTTCCTTGCGCTTCTGCGCTCCTGTTCCTGGCGCGAGCCGGTCATCGGGTAG
PROTEIN sequence
Length: 121
VNRLIDRAEGERVILIDGIAMSMDDCPVRDVLDSVGGKWTSLMILGLADGPRRFSQLRRFIPDISQRMLTQTLRDLQRDGYLTRTVYPTQPPSVEYCLTPLGHSFLALLRSCSWREPVIG*