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scnpilot_p_inoc_scaffold_38121_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1044..1700)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWG7_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 207.0
  • Bit_score: 233
  • Evalue 2.50e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 207.0
  • Bit_score: 233
  • Evalue 7.20e-59
Transcriptional regulator, TetR family {ECO:0000313|EMBL:BAL97354.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 207.0
  • Bit_score: 233
  • Evalue 3.60e-58

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
AGGTATATGAGATACGTCGTCACCGCAGTGCCCAAGGCGCCCGCGAGCGGGCCGCGCGCCCGGACCTATGCGGCGCTGCTGCAGGCCGCCATGGAACTGATCCGCACGGGCGTCATGCCGTCCGTCGCGCAGGTGGCGGCGCGCGCCGACGTGTCGCGCGCCACCGCGTATCGCTATTTCCCGAGCCGCAGCAAATTGATCGCCGCGGTCGTCGACGCATCCTTGGGCCCGGTGCGCACCACGGCTTCGCGGCACGAGAGCGCCCGCGAGCGAGTCATGGAACTGTTCGATCACACCTTTCCCCGGTTCAAGGAATACGAAACCGAAATGCGCGCCGCGCTGCAGCTCGCCCTGGAGCACCGGGCGCTGGAGCGCGCCGGCTTGCTGGACGAAGAGCCCTACCGGCGGGGCCACCGCGTGAAGATACTTGCGCAGGCTCTGCTGCCGTTCGAGAACCAGATTCCCAAGCCCTTGATCCGCCGCCTGCACAAGGCGCTGTCCACCATCTATGGATACGAAGCCTACGTGGTGCTGAAAGACATCTGGAACGCCTCCGACCGCGAGGTGGAATCGACGGTGCGCTGGATGGCCACGGCGCTGATAGACGCCACATTGGCGGAAGCGGCGAAGCAAGCGGGCGGAAAACAACAGAGCTGA
PROTEIN sequence
Length: 219
RYMRYVVTAVPKAPASGPRARTYAALLQAAMELIRTGVMPSVAQVAARADVSRATAYRYFPSRSKLIAAVVDASLGPVRTTASRHESARERVMELFDHTFPRFKEYETEMRAALQLALEHRALERAGLLDEEPYRRGHRVKILAQALLPFENQIPKPLIRRLHKALSTIYGYEAYVVLKDIWNASDREVESTVRWMATALIDATLAEAAKQAGGKQQS*