ggKbase home page

scnpilot_p_inoc_scaffold_37417_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 18..731

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Clostridium sp. D5 RepID=F0YX57_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 219.0
  • Bit_score: 308
  • Evalue 5.20e-81
  • rbh
Putative membrane protein {ECO:0000313|EMBL:EGB93545.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 219.0
  • Bit_score: 308
  • Evalue 7.30e-81
membrane protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 221.0
  • Bit_score: 257
  • Evalue 3.90e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. D5 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGTCTAATTTAAATCAGCAAGCAAAATCAAATTCAACAAAGTCAAAATCAACAAAGTCATATGAGGCCTCAGTGCATACCTTCGGACGAATCTGGATGCTTTGTGCATTTTTTATGATGCTGGGCATCCCGGCTCTGATCAGCACCTATTTTAGCGCGTGGCCAGCAGCGAGTAGTGTGATAAAAGGTCTTTTAGGCGTTGCACCTATCTTTTGGACGGTAGCGGTTATTGAGATTTTAACTTATACGCCGATGCTTGGCTCAGGCGGTTCCTATCTCGGGTTTGTCACTGGTAATCTGACCAATCTAAAGGTACCCTGTGCACTCTATGCCATGGAAAATGCAAAGGTGAGCCAAGGGACACTTGAGGGCGAGGTTATCTCGACGATCGCCATAGCGACATCATCTATTGTAACGACGGTGATTATCGCATTAGGCGTATTGCTGTTGACACCTCTGACTCCGATTTTAAATTCAGAGCTACTAAAGCCAGCATTTGACAACATTCTGCCAGCGTTGTTCGGTGGTCTTGCCGTAGTCTATGTCAGTAAAAACTGGAAAATTGCGATGGCACCATTGGTCTTTATGTGCCTATTGTTTATTCTAGTGCCTTCTCTGGCGAGCTCTGTGTCGGTTTTGGTACCAGTAGGAGCTTTGATCGCCATCGTTACAGCGCGGATTTTATATAAAAAGGGTTTACTAGAAGACAAATAG
PROTEIN sequence
Length: 238
MSNLNQQAKSNSTKSKSTKSYEASVHTFGRIWMLCAFFMMLGIPALISTYFSAWPAASSVIKGLLGVAPIFWTVAVIEILTYTPMLGSGGSYLGFVTGNLTNLKVPCALYAMENAKVSQGTLEGEVISTIAIATSSIVTTVIIALGVLLLTPLTPILNSELLKPAFDNILPALFGGLAVVYVSKNWKIAMAPLVFMCLLFILVPSLASSVSVLVPVGALIAIVTARILYKKGLLEDK*