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scnpilot_p_inoc_scaffold_37793_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..801)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38D30 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 252.0
  • Bit_score: 237
  • Evalue 1.60e-59
Putative Transcriptional regulator, winged helix family {ECO:0000313|EMBL:CCH77462.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetra similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 261.0
  • Bit_score: 193
  • Evalue 3.80e-46
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 267.0
  • Bit_score: 183
  • Evalue 6.10e-44

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Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGCGGGTGCGCGACCTCGGACTGCTGAGCGTCGAGGTCGACGGCGTCGAGCAGCCGCTGCGCGGTCGGCGCCCGCAGTTCATCCTCGCCCGCCTGCTCGTGAGCGTGAATCAGCGGGTCACCGCATCCGAGCTCGTGGAGGCGGTGTGGGGTGACGACCTCGCGGATCACACGTCCACGCTCGAATCGCACGTCTGGCGCCTGAGGCAGACGCTCGAACCGCGCCGCGCCGCACGACAGCCGGCACGGGTCCTGATCACGGATGTCGACGGCTACCGGCTTCTCGCGCGGATCGAGGACGTGGACTCGCTCCGCTTCGAGCGGGATGCGGGGGAGATCCGCGAGCTCACCGCGACCGCGGATCCCGGGCGCGTGCTGCAGCAGTGCGACGACGCCCTCGCCCTGTGGAGCGGAGACCCGTTCGCGCCGGCCTCGGACGAAGTGTGGGCGAGCGCCGCGGTCGCCCGCCTGCGGGAGATGCACACGGAGATCGCCGCGACCAGGGTGGACGCCCTCCTCGACCTCGATCAGAACGAGCGGGCGCTCGCCGACCTGGAGCGCCTGATCGCTCGGGCGCCTCTGCACGAGCGCTTCTGGACGCAGCGGATGCTGGCGCTGCACCGCGCCGGCCGCACCGATCAGGCGCTCGAGGCGTACCAGCGGCTCCGCCGCCTGCTCGACGACGAACTCGGGCTCGAACCCGGCGTCGAGGTGGACGACCTGCACCACCGCATCCTCGACCGCGACCCGACCCTCGTGACGAGGCAGACCGTCATCGCCGCCTCGGCGGACGCGATCCGG
PROTEIN sequence
Length: 267
MRVRDLGLLSVEVDGVEQPLRGRRPQFILARLLVSVNQRVTASELVEAVWGDDLADHTSTLESHVWRLRQTLEPRRAARQPARVLITDVDGYRLLARIEDVDSLRFERDAGEIRELTATADPGRVLQQCDDALALWSGDPFAPASDEVWASAAVARLREMHTEIAATRVDALLDLDQNERALADLERLIARAPLHERFWTQRMLALHRAGRTDQALEAYQRLRRLLDDELGLEPGVEVDDLHHRILDRDPTLVTRQTVIAASADAIR