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scnpilot_p_inoc_scaffold_38393_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1991..2374)

Top 3 Functional Annotations

Value Algorithm Source
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RH53_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 127.0
  • Bit_score: 241
  • Evalue 4.20e-61
trbC; mating pair formation conjugal transfer TrbC transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 127.0
  • Bit_score: 240
  • Evalue 3.40e-61
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AIJ47716.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 127.0
  • Bit_score: 240
  • Evalue 1.70e-60

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACGCAGATGACCATTCCTGCTTTCCGTATTTCTGCAAATCCGGCTTTGCGTCTTGCGCGGCTGCGCTGCCTGGCCCGCCCTGCGGGGCAAGGGCTGCTGCTGGCCGCGCTGCTGCTGTTCCTGGCCGGAACCGCGCAGGCCGCCGGTTCCTCGATGCCGTGGGAAGGCCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATCGCTACGGGCCTCGCGCTCGCCTTCGGCGACACGTCCGGCGGCTTCCGCAAGCTGATCCAGATCGTCTTCGGTCTGTCCATCGCCTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCCGTCGTATGA
PROTEIN sequence
Length: 128
MTQMTIPAFRISANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*