ggKbase home page

scnpilot_p_inoc_scaffold_37030_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(276..989)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CDF5EE related cluster n=1 Tax=unknown RepID=UPI0003CDF5EE similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 237.0
  • Bit_score: 352
  • Evalue 4.10e-94
GntR family transcriptional regulator {ECO:0000313|EMBL:ESY95330.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 237.0
  • Bit_score: 351
  • Evalue 1.30e-93
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 347
  • Evalue 2.80e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
TTGGCGAAGACCAGCGAGTTCAGGATTTCGCCGCCAGCCGGCCTCGAGGAGATCGACGTCTCGAGTCAGCGGGCGCTGTCGCTGTACGAGATCATTCGCGACGACATCATTTCGGGGCGGCTGAAGCCGAACGAACGGCTGGTGGTCGCCGATCTGGCCGAGCAGCTCGGGACCTCGACCAATCCGGTGCGCGAAGCGCTGCAATTGCTGCGCGGCGAGGGCTTCGTGATCTTCTCGCCCAATCGCGGCGCGCGCGTGCGCCCCATCGACCAGGATTTCGTGCGCAACATCTACGAGATCAGCGCCCTGATCGAGCCGGCGCTGACGCGCTGGTTCGTGGGTATGGCGACCGACGCCGACATTGCCGAGCTGGAGCGGATCGAGCGGCTGATCGAGCAGAACAATTTCGTGGATCCCGTCCTGCACAGCGGGTTGGACGTGCAGTTCCACACCGTCATGTATCAGCGCCACTACAACCGGCACGCCGCCGAAATCTGGTGGAAGCATCGCCAGGTGCTGCGGGCGGTCAACCAGCGCTTCAACTACACGGTGGCGCGGCGTGGCCAGGTGATCCGCGATCACCGCGAGCTGATCGGGCTGGTCAAGGCCGGCGACGCCGAGCAGGCGGCAGCGGTGGTCGCCCGGCTCGTGGAAGGCTCGGGCCGGCATCTGCTCGAGCTGATGCGCGCCTACGACGCCGCCAAGGCCGGGTAG
PROTEIN sequence
Length: 238
LAKTSEFRISPPAGLEEIDVSSQRALSLYEIIRDDIISGRLKPNERLVVADLAEQLGTSTNPVREALQLLRGEGFVIFSPNRGARVRPIDQDFVRNIYEISALIEPALTRWFVGMATDADIAELERIERLIEQNNFVDPVLHSGLDVQFHTVMYQRHYNRHAAEIWWKHRQVLRAVNQRFNYTVARRGQVIRDHRELIGLVKAGDAEQAAAVVARLVEGSGRHLLELMRAYDAAKAG*