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scnpilot_p_inoc_scaffold_37042_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(524..1306)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4S1_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 254.0
  • Bit_score: 304
  • Evalue 8.20e-80
  • rbh
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 254.0
  • Bit_score: 304
  • Evalue 2.30e-80
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACB34634.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (s similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 254.0
  • Bit_score: 304
  • Evalue 1.20e-79

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGAACAAGACGACCCAAAAGACGACGCAGGTCGCCGGGGCCCAGACACTCAGGCGTGGCCTCGCCATCCTGCGTGTTCTTACTCGCGTTGATCCGAAAGGTTTGCGCATGAGCGAAATCATCCAGAAACTCGGCCTCAATAAAGCGACTTCCGTGCGCCTGACCCTTACCCTTACGGAAGAAGGCTTTCTCGTCCACGACCCCGCAACCGGGCGTTATCGCCTGGGGCCGGAAGTCTATGCCGCCGGCCTGGTCGCGGAACCCAATTACCAGCTTCCCAAAAAAGCCGCTCCCGTCTTAAGAGCCCTGGCCGACCAATCCGGCGACACAGCCTTCCTGACGGTGCTGCATGGGCTCGACACCATTTGCCTGCTGCGCGAAGAAGGCAGCTTTCCCATTCGAAACCAGCTGGTCAAACCCGGAGACCACTGGCCTCTCGGCGTCGGGGCGGGAAGCTGCGCCATGCTTTCCATGCTGCCCGACGAAGAGATCGCCCAAGTGCTCGCCTACAATGCCGCTCAGCGGGCGAGCAACTTTCCGCGCTTCACCGACGAAGCCATCTGGGAGCTCGTCCACGACACCCGCCATCATGGCTACTGCTTGCAGCCCGGGCTGGTCCTCGAGGACAGCTGGGCGATCGCCGTCGGCATACCGGATCAACGCGGCCGCCCGGTCGCGTCGATCAGCATCGCCGCCATTCGTTCGCGCCTGGGCCATCCCCGCGCGCAGCAACTGGGCCAGACCTTGCTGGAACACGGGAAAACACTGGCCGGCACACAGTGA
PROTEIN sequence
Length: 261
MNKTTQKTTQVAGAQTLRRGLAILRVLTRVDPKGLRMSEIIQKLGLNKATSVRLTLTLTEEGFLVHDPATGRYRLGPEVYAAGLVAEPNYQLPKKAAPVLRALADQSGDTAFLTVLHGLDTICLLREEGSFPIRNQLVKPGDHWPLGVGAGSCAMLSMLPDEEIAQVLAYNAAQRASNFPRFTDEAIWELVHDTRHHGYCLQPGLVLEDSWAIAVGIPDQRGRPVASISIAAIRSRLGHPRAQQLGQTLLEHGKTLAGTQ*