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scnpilot_p_inoc_scaffold_37308_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2..868)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KJ91_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 419
  • Evalue 3.30e-114
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 247.0
  • Bit_score: 419
  • Evalue 9.40e-115
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS22388.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 247.0
  • Bit_score: 419
  • Evalue 4.70e-114

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAACTTCACCTTCAAGCAGCTGGAGGCCTTTCTCTTCAGCGCCAAGCTCCAGAGCTTCAGCGCCGCGGCGGTGAAGCTGCACACCACGCAGTCGGCCATCTCCAAGCGGCTGGCGGAGCTGGAGGAATCGCTGGGCGGCCCCTTGCTGCATCGCACCTCGCACGGGCTCGAACTGGCGCAGGCCGGCCGCGAGCTGCTGTCGCTCGCGGAAGAGGCGCAGCGGCTCTGGCAGCGCATCCAGCACGACATCAGCGTCGACAAGACACTGCGCGGCACCTTCCGCGTGGGCGTGACGGAGCTGATCGCCATGACCTGGCTCACCAGCCTCATACAGCTGCTGCAGAAGCTGCATCCCGAGGTAACGCTCGAGCCGGTGGTCGACGCGGGGCTCACGCTCTTCGAGCGGCTGGAGGCCAACAAGCTCGACCTGTCCATCATGCCGGGCATCTTCTGGGGGCAGGCCTTCGAGTCGATCAAGGTGGGGCAGGTCGACCAGGCCTGGATCGCGAGTCCGCGCCTGGGCGTTCCCAACCGGGCGCTGAAGCCGCACGAGTTTGCCGACTACCCGGTGATCGAGCAGCCCGCCGGCGCCTCGAAGAATCGGTTCTATGAAGCCTGGCGCGCGGAGCACGGCTTTCGCTTCGGCAAGGTGGGCTACGCCAACGACGTCGTCATGCTCTCCGAGGAGGCCCTGGAGGCCCTGGCCGGCGTCGAGGTGCTGATCGTCGATGCCATGCGCTACCGGCCGCATCCCACGCACGCCCATCTGGAACGCGCGCTGCAGTGGATAGATCGCCTGAAGCCGGCCCGGGCGTTCTTGACCAACATGCACGTGGACATGGACTATGCCGAGGTCGACCGCGTG
PROTEIN sequence
Length: 289
MNFTFKQLEAFLFSAKLQSFSAAAVKLHTTQSAISKRLAELEESLGGPLLHRTSHGLELAQAGRELLSLAEEAQRLWQRIQHDISVDKTLRGTFRVGVTELIAMTWLTSLIQLLQKLHPEVTLEPVVDAGLTLFERLEANKLDLSIMPGIFWGQAFESIKVGQVDQAWIASPRLGVPNRALKPHEFADYPVIEQPAGASKNRFYEAWRAEHGFRFGKVGYANDVVMLSEEALEALAGVEVLIVDAMRYRPHPTHAHLERALQWIDRLKPARAFLTNMHVDMDYAEVDRV