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scnpilot_p_inoc_scaffold_37394_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1375..1725)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein Vgr n=1 Tax=Variovorax paradoxus RepID=UPI00037BEB3A similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 116.0
  • Bit_score: 212
  • Evalue 1.90e-52
hypothetical protein Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 132.0
  • Bit_score: 116
  • Evalue 3.40e-23
Rhs element Vgr protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 116.0
  • Bit_score: 112
  • Evalue 7.50e-23

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Taxonomy

RIFOXYD12_FULL_Rhodospirillales_60_8_curated → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GGCACGCGCGCGCTGGAAGTCACGGGCAACGAGACGCACGACAACAAGGCCAACTTCACGCAGACGGTCAGCGGCAACTACGAGCTCAAGGTTACGGGCAACCTGGTGATCGACGTGACGGGCACGCTGCTCATCAAGTCGGCCCAGACGCTGGACCTGAAGGCCGGCACCGACCTTGGCGCCAACGCCGGCATCAACTTCAAGGCCGAGGCCGGCGTGGCCCTGTCAGCCAAGGGCGGCGCCTCGCTGACGAACGAAGCGCCGTCGATCAGCAGCAAGGCTTCGGCCATGAACGCCGTCGAAGGCGGCGGCATGGTCACGCTCAAGGGCGGGCTGGTGAAGATCAATTGA
PROTEIN sequence
Length: 117
GTRALEVTGNETHDNKANFTQTVSGNYELKVTGNLVIDVTGTLLIKSAQTLDLKAGTDLGANAGINFKAEAGVALSAKGGASLTNEAPSISSKASAMNAVEGGGMVTLKGGLVKIN*