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scnpilot_p_inoc_scaffold_39295_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..992)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat-containing protein n=1 Tax=Acidovorax radicis RepID=UPI00023782A1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 340.0
  • Bit_score: 383
  • Evalue 2.30e-103
RHS repeat-associated core domain protein containing protein {ECO:0000313|EMBL:EJE51323.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 251.0
  • Bit_score: 331
  • Evalue 1.10e-87
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 308.0
  • Bit_score: 189
  • Evalue 1.80e-45

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGCAGTCCCATTGGTTGACGTTCAACGTGATCTCAAGTTCGAGGTGCAACTCTCGCCACCAAGAATTGCGATCGCCTAGCGCTTCAAAAATAATAGCGTCTAACGCTTGCCTATCAAGCGCTAGAGCCATATTCCGTCAAAAATTCAGTCGTCTTTCTCAAGTCCTATCTCACGACACCAGCGCCAGCACCAGCTACCAGTACGACGCGGCGGGCAACCTGCAAAGCGACGGCCTGCGCCAGTACCACTACGACAGCCAGGGGCGCCTGCAAAGCAGCCAGACGGGCCAGGGCCCGGACGCGCCCACCACGCGCTACGCGCACAACGCCCTGGGCCAGCGGGTCTTCAAGACCGAGGCGCTGTACAGCACCAGCTCCGGCCTATCGGAAGACGACGAGGAGGACCTGGGCTTCCTGCAAAGCATTGCCCAGTTCTTCACCCGCCTGTGGAGCCCGAAGAACAGCGAGGCCGAGCACCTGGGCTGGGCCTACCTGTACGACGAAGAGGGGAGCCTCGTGGGCGAATACGGCATGGGCGGGGCCAATAGCGGCGGCCAGGGCCAGTACTTCTACCTGCCCACGGCCAGCGGTCCCCTGCCGATCGCCGCCGAGATCGATGGGTTGCTCTATGCCATCCACAGCGATCACCTCAACACTCCCAGGCAGCTGACGCAGCAGGGCGGCCAGCCCGCCTGGCAGTGGGCCTATAGCGCCTATGGGGACGAGGCGCCGACGCTGGGCGCGAACCGCTTTACCAACGAGACGACGAACCCGACGACGGGATCGACCAGCACCCCGCCGGTGCGCTTCAACCTGCGCTATCCGGGGCAGTATTTTGATGAGGAGACGGGGCTGCATTACAACTGGCACCGCAGCTATGACCCGAGGGTGGGGAGGTATACGCAGAGTGATCCGATTGGGCTTGACGGAGGGTGGAATCGGATGGCGTATGTGGAGGGAGATCCGCTGGGAGATATTGATCCGGACGGG
PROTEIN sequence
Length: 330
MQSHWLTFNVISSSRCNSRHQELRSPSASKIIASNACLSSARAIFRQKFSRLSQVLSHDTSASTSYQYDAAGNLQSDGLRQYHYDSQGRLQSSQTGQGPDAPTTRYAHNALGQRVFKTEALYSTSSGLSEDDEEDLGFLQSIAQFFTRLWSPKNSEAEHLGWAYLYDEEGSLVGEYGMGGANSGGQGQYFYLPTASGPLPIAAEIDGLLYAIHSDHLNTPRQLTQQGGQPAWQWAYSAYGDEAPTLGANRFTNETTNPTTGSTSTPPVRFNLRYPGQYFDEETGLHYNWHRSYDPRVGRYTQSDPIGLDGGWNRMAYVEGDPLGDIDPDG