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scnpilot_p_inoc_scaffold_39687_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3..1043)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4CN55_BRARP similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 187.0
  • Bit_score: 89
  • Evalue 7.20e-15
BnaC04g12900D protein {ECO:0000313|EMBL:CDY34509.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pe UNIPROT
DB: UniProtKB
  • Identity: 36.1
  • Coverage: 183.0
  • Bit_score: 91
  • Evalue 3.50e-15

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Taxonomy

Brassica napus → Brassica → Brassicales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1041
ATGGCGGAGAAGCAGTCGAAGTACTGGGACGACCAATTTCAGACAGGGAGTGAGGATGCGGCTGCAAAGACCGCGGGCGAGCCTAGCGAGGCGGAGTACATGGCGGATGGGTACTATGACTGGATGGTGGACGCCGAGGACGTGTGTGCGACGGGAGTGCTGGACTGGCTGCGGCCTGAGCACGACATCCTCCTCGTCGGCTCCGGCCGCTCGCGTTTGCCCATCGTGCTCTACGAGCGCGGGTTGCGTCGAATCACCTGCACTGACATCTCATCTGTGGTCACTGATGACATGGCGCGCCGCCACGCTCAGTCGCACCCTGAAATCCGTTGGGAAGTGAGTGATGTCACTGACATGTCCGCCTATGCAGACGCATCTTTCGATGCCGTCATCGATAAACACACCAGCGACACACTGCAGTTCCGTTCGCGCACCCGTGACGGGCCGCTGCTGCTGGCCGGGATGCTGGCGCACGTGCAGCGTGTGCTGCGGCCCGAGGGGCGCTTCGTCGTGGTGACGCCGCGCCGCCGCCCGCGCTTCCTGTACACAGCGGAATGGCATGTGCTCGCGCCCAAGGTCGTCCGGCGCGGCGGGGACGCGCCTCTGCGCGTGCCTGGTGCCAACTCAAGTGGCGTCGCTACTGCAGCCTTGCGCTCGGCGACGTCGAACAGCTCTACTGACTCTGCTCGAGATGATGGTCGAGCACAGGTACAGAGTAAGGCCGATGTCGACGATAATAACTCTGCCCATGGTGATGAGGACGACGAGTCTGCGCCTCTACGCGGTGGGAACGGTGGTTTGATTAGTGCGCACAAGGTTAACGTTGACTATGCACATGTTTGCATCAAGCCCGCACCGCCAGCTGGCGCCGGCTCGACTGCTGATATGACTGCAAAGACTGGTCCTGTTGTTGAGGGTGTTGCGCTGATCCGTCACGTTTATACGTCACTGCAGGCGACAGAAGAACGCAACAACACACTGCGCAAGATGCTGCTTGCAGTCCGCACTGCCGCGCTTCCTAACGCTGATACAACAGCCGCG
PROTEIN sequence
Length: 347
MAEKQSKYWDDQFQTGSEDAAAKTAGEPSEAEYMADGYYDWMVDAEDVCATGVLDWLRPEHDILLVGSGRSRLPIVLYERGLRRITCTDISSVVTDDMARRHAQSHPEIRWEVSDVTDMSAYADASFDAVIDKHTSDTLQFRSRTRDGPLLLAGMLAHVQRVLRPEGRFVVVTPRRRPRFLYTAEWHVLAPKVVRRGGDAPLRVPGANSSGVATAALRSATSNSSTDSARDDGRAQVQSKADVDDNNSAHGDEDDESAPLRGGNGGLISAHKVNVDYAHVCIKPAPPAGAGSTADMTAKTGPVVEGVALIRHVYTSLQATEERNNTLRKMLLAVRTAALPNADTTAA